Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0094 ATGAGTTTTGTTTTTCGAGGAGCAAGAGCTGATTTAGAAAATGGGTTTCCAGGATTTATACCTGAGAGGCGCGCGTTGCGTGTTCATGCAGCACGTCCTAGTAATTCCAACTCACTCACTTTTCTCGTAACAGTTCTCCTGTTATTCATGATACTGAACTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTAGTGCTTGGTGTTTTCTTGATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCACAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGCCTTCTTGGTCACACAGAACTACGGTTGCATATGCCTCCATCAATAGCACTGGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCGGATAATGTTTCTACTGCACCTTCGATGACTGAGGAAGAGATAAATGCTCTTCCTGTCCACAAATACAAGGTTTCTGGTCCCCAAAAAAGTGGTCCCTCAATTCAACAAGCATCACCCTCCACTTCTGCTGAGCAAAAGACACAGGATAATTCAAAGGCGGTTGGAAACACGAAAGCCTCCGATGATGAGCTCACTTGCAGTGTATGCTTGGAGCAAGTTAATGTTGGAGATGTACTTCGTAGCTTGCCCTGCTTGCATCAGTTTCATGCTAATTGTATTGATCCCTGGCTGCGGCAACAAGGGACGTGCCCTGTCTGCAAATTTCGAGCAGGATCTGGATGGCATGAAAATGGACATCATGATATTGCAGACATGGTTTGA 825 0.4618 MSFVFRGARADLENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQKSGPSIQQASPSTSAEQKTQDNSKAVGNTKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWHENGHHDIADMV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0094 274 PANTHER TARGET OF ERK KINASE MPK-1 1 269 - -
Tpr3g0094 274 SMART ring_2 214 254 IPR001841 -
Tpr3g0094 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 269 - -
Tpr3g0094 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 260 IPR013083 -
Tpr3g0094 274 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Tpr3g0094 274 Pfam Ring finger domain 213 255 IPR001841 -
Tpr3g0094 274 SUPERFAMILY RING/U-box 208 257 - -
Tpr3g0094 274 CDD RING-H2_PA-TM-RING 213 255 - -
Tpr3g0094 274 MobiDBLite consensus disorder prediction 173 205 - -
Tpr3g0094 274 MobiDBLite consensus disorder prediction 176 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0094 Tpr-Chr3 1158826 1163569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0094 1 274 C3H Transcription Factor Family AT3G55530 76.534 3.04e-143 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0094 K16283 - gmx:100777936 453.366