Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0086 ATGGCAAAAACACCCTTGCATCTTCTCTGCATATTGATCCTTCTAGCCTCAAACTCAATACAATCTCATTCTCTACAAGATGAGTTTTTCTTTTCTGGATTCAATGAAGCTGCTACCAACATAACCTTAAACGGAGGTGCAGTAATTGAACACAAAGGAACAATTCGTTTAACAAACGACACTGAAAGAGTACTTGGTCATGCTTTTTACTCAAACCCAATCCAATTCAAAAACAAAAACAATACCAAAGTTTTCTCTTTTTCAACTTCTTTTGCTTTTGCAATTATCCCTCAATATCCAAAACTAGGAGGCCATGGATTTGCCTTCACAATTTCTCCTTCCAACAAACTCTCAAATGGTTATCCAAGTCAATACCTAGGCCTTCTCAATCCACATGATTTAGGCAACTTTTCAAATCACCTATTCGCAGTCGAATTCGACACAGTTCAAGACTTTGAATTCAATGACATCAATGACAATCATGTTGGTATCAACCTTAACAACATGGTATCAAACAAATCAGTAAAAGCATGTTTTTTTACTGATGGGTCAGTTCAAGACCTCAATTTGAAGAGTGGTAGTGTGATTCAAGCATGGATCGATTACAATTCTTCGACGAATCATCTTGAAGTTAGACTTTCACCAACTTCATCAAAACCAAGTTCACCAATCTTATCATACAAATTAGATCTAACACCAATTCTTCAAGAAACTATGTATATTGGGTTTTCTTCTTCAACAGGGTTACTCTCTAGCTCACACTATATACTTGGTTGGAGCTTCAAAATCAATGGAGAATCAAAAACACTGTCTTTGAAACATCTTCCTTCACTCTCTTCACATACCAATCACAGTAAAAAGTCCTTAATCTTAGGTCTATCTGTTTCATTTCTGATTCTATTAGTTTTAGCAGTAAGTTTAGCTTTTTACATTAAGATGAAAAACTGCGATGTTATAGAAGCTTGGGAACTCGAAGTAGGTCCACATAGATTCTCTTACAAAGAACTGAAGCAAGCAACAAAAGGGTTCAAGGAAAAAAACCTTCTTGGATTTGGAGGTTTTGGTAAAGTTTACAAAGGAGTGTTAGTGTCACCAAATTCGAAAACCGAAATCGCTGTCAAACAAATCTCTCATGAATCAAAACAAGGGGTGCAAGAGTTCATATCAGAAATAGAAACAATAGGAAAACTTCGTCATAGGAACTTAGTACAGTTACTAGGTTGGTGTCGGAAGAAAAACGATCTTATATTAGTGTATGATTATATGGAAAATGGAAGTTTAGATAAATACATATTTGAAAAACCAAGAAGAATATTGAAATGGGAAGAAAGGTTTAGGATCATAAAAGGTGTAGCTTGTGGGTTAGTTTATCTTCATGAAGAATGGGAACAAACGGTTATACATAGAGATGTTAAAGCTGGGAATGTTCTTTTGGATTCTGATATGAATGCAAAGTTAGGTGATTTTGGTTTGGCTAAGCTTTATGATCATGGTGAGAATCCAAGTACAACAAGGGTGGTTGGAACTATGGGATATTTAGCACCAGAGTTAACAAGAACAGGTAAACCAACGACGAGTTCTGATGTTTTTGCGTTTGGGGCGTTGTTGTTGGAGGTTGTTTGTGGAAGGAGGCCTATTGAGGGGAAAGCGTTGCCGGAGGAGCTTGTTTTGGTGGATTGGGTTTGGGATAAGTGGAGAGTAGGGGAAGTTATGGAGGTTGTGGATAAAAAGTTAGGTGGTGTTTATGATGAGGTGGAGGTTTTGTTGGTGGTTAAGGTAGGTTTGTTGTGTTCTGATGAGTTGCCACAGAGGAGGCCGACGATGAGGCAGGTGGTTAGGTATTTGGAAGGGGAGGTGAAGTTGCCAGAGATTGATGGGTTTGCGGGGAAAAAGGAGGGGTATTCGTATCGGAGGGAGTTTTTTGAAAGGGATAATACTTGGTCGTCGGCCGGTGATGACGTGGAGAGTGCGTTTGCATCATCTCTTCAACTTTCCGGTGGCCGGTAG 2007 0.3857 MAKTPLHLLCILILLASNSIQSHSLQDEFFFSGFNEAATNITLNGGAVIEHKGTIRLTNDTERVLGHAFYSNPIQFKNKNNTKVFSFSTSFAFAIIPQYPKLGGHGFAFTISPSNKLSNGYPSQYLGLLNPHDLGNFSNHLFAVEFDTVQDFEFNDINDNHVGINLNNMVSNKSVKACFFTDGSVQDLNLKSGSVIQAWIDYNSSTNHLEVRLSPTSSKPSSPILSYKLDLTPILQETMYIGFSSSTGLLSSSHYILGWSFKINGESKTLSLKHLPSLSSHTNHSKKSLILGLSVSFLILLVLAVSLAFYIKMKNCDVIEAWELEVGPHRFSYKELKQATKGFKEKNLLGFGGFGKVYKGVLVSPNSKTEIAVKQISHESKQGVQEFISEIETIGKLRHRNLVQLLGWCRKKNDLILVYDYMENGSLDKYIFEKPRRILKWEERFRIIKGVACGLVYLHEEWEQTVIHRDVKAGNVLLDSDMNAKLGDFGLAKLYDHGENPSTTRVVGTMGYLAPELTRTGKPTTSSDVFAFGALLLEVVCGRRPIEGKALPEELVLVDWVWDKWRVGEVMEVVDKKLGGVYDEVEVLLVVKVGLLCSDELPQRRPTMRQVVRYLEGEVKLPEIDGFAGKKEGYSYRREFFERDNTWSSAGDDVESAFASSLQLSGGR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0086 668 SMART serkin_6 343 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0086 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 278 IPR013320 -
Tpr3g0086 668 CDD lectin_legume_LecRK_Arcelin_ConA 28 265 IPR001220 GO:0030246
Tpr3g0086 668 SUPERFAMILY Protein kinase-like (PK-like) 318 615 IPR011009 -
Tpr3g0086 668 Gene3D - 25 264 - -
Tpr3g0086 668 ProSitePatterns Protein kinases ATP-binding region signature. 349 374 IPR017441 GO:0005524
Tpr3g0086 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Tpr3g0086 668 Gene3D Transferase(Phosphotransferase) domain 1 422 630 - -
Tpr3g0086 668 CDD STKc_IRAK 349 617 - -
Tpr3g0086 668 ProSiteProfiles Protein kinase domain profile. 343 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0086 668 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 4 668 - -
Tpr3g0086 668 Gene3D Phosphorylase Kinase; domain 1 328 421 - -
Tpr3g0086 668 Pfam Protein tyrosine and serine/threonine kinase 346 614 IPR001245 GO:0004672|GO:0006468
Tpr3g0086 668 PANTHER - 4 668 - -
Tpr3g0086 668 Pfam Legume lectin domain 27 274 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0086 Tpr-Chr3 1093644 1096054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0086 24 624 Receptor kinase-like Gene Family AT3G55550 60.755 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g0086 PK_Tyr_Ser-Thr 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0086 - - gmx:100787552 908.286