Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0080 ATGGAGGAATCTCAAAATATGATGTGGATGAAAAGGAAACAAGTCTTGAACTCACATATTGAAGAAGTACCATCATTTGAAGTTGGAGCTATGAACATGAACAACAAGTCTTGGGAGGAAAAAGCTTTTGCAGAAGATGCAGCTAGGATACTTGGTGGATGTATATGGCCTCCAAGATCTTACTCATGTCATTTCTGTAAAAGAGAGTTTAGGTCTGCTCAAGCTTTAGGTGGTCACATGAATGTTCATAGAAGAGATAGAGCTAAGCTCAAACAAAGTCTTGGTCACCATAATGAATTAGACCTTCATTCTCTTCATAAAAATCATTTTACAACAAGCAGAGTTAACTCATCTTCTTGGCCATCAACTATATCTAAACAAGAAAACTGTTTTGAGTCAAACATGTCTTCTTCATATTCTTCTTCAATTAGATGGGGAAATTATAACCACATGGTGTCTCATGATTTTGAACCAAAAGGGTTACTAGTTAATGCAAGGGAACAAATTTTCAAAGGTTATAGTTGCAATGATTATGTTGAAACAAGTTTGTCTATGGGACAAAATAATTCAATGTTTGGCCAAAAATTACTAACTGATGATTTTTGTGGGGACAAAGGAAGCAACACTTGTAAAAAACCAAGGACAAGTTCTATTTTTCATCACAAGCCATGTTTGAATGATAGATGTTTAACTTTTCAGTCTGCAGATCAGTTTGTGAATATTGGAATTAAGCCTGGAATGGAAGACTTGGATCTTGAACTCAGACTAGGGAAATTAACACAGAAAGTTTAG 792 0.351 MEESQNMMWMKRKQVLNSHIEEVPSFEVGAMNMNNKSWEEKAFAEDAARILGGCIWPPRSYSCHFCKREFRSAQALGGHMNVHRRDRAKLKQSLGHHNELDLHSLHKNHFTTSRVNSSSWPSTISKQENCFESNMSSSYSSSIRWGNYNHMVSHDFEPKGLLVNAREQIFKGYSCNDYVETSLSMGQNNSMFGQKLLTDDFCGDKGSNTCKKPRTSSIFHHKPCLNDRCLTFQSADQFVNIGIKPGMEDLDLELRLGKLTQKV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0080 263 PANTHER OS07G0101800 PROTEIN 1 263 - -
Tpr3g0080 263 Pfam C2H2-type zinc finger 61 85 - -
Tpr3g0080 263 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Tpr3g0080 263 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 263 - -
Tpr3g0080 263 Gene3D Classic Zinc Finger 58 120 - -
Tpr3g0080 263 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Tpr3g0080 263 SUPERFAMILY beta-beta-alpha zinc fingers 58 88 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0080 Tpr-Chr3 1028910 1030560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0080 20 93 C2H2 Transcription Factor Family AT2G37740 60.811 7.83e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g0080 zf-C2H2_6 4.1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0080 - - aprc:113851273 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0080 3 1028910 1030560 Tpr4g3209 4 38077109 38077912 PCT