Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0074 ATGGAACCTATTACCCTTGAGATTCCTAGTGGAGAAGATATTGCGGAGAGTATAATCAATTATGCACGGCACCGCCAAGTCAGCTTAACAGTGTTGAGTGGCTTCGGCCCTATTTCAAGCGTCACCCTTGCCCCAAATTTATCCATGGAAGGACCATTTCAGATGACATCGCTATACGGAACGTATATCAATGCTGATTGTGATGATGTTCCCCCACGGTTCATCGCTAATCCACCACATTCATCATTTTCAGTTGTCTTCACTGACAATGATGGAAAGGTGTTTGGAGGAATTGTTGGAGGGGAAGTTATTGCTGCTGACGTAGTTTACGTTAACGTTGTTATTGTCAATGGTTTTGACTTTGATGTTGTGGATGATGATGGTTCAACTCAGAGTGATAGCGACTAG 408 0.4338 MEPITLEIPSGEDIAESIINYARHRQVSLTVLSGFGPISSVTLAPNLSMEGPFQMTSLYGTYINADCDDVPPRFIANPPHSSFSVVFTDNDGKVFGGIVGGEVIAADVVYVNVVIVNGFDFDVVDDDGSTQSDSD* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0074 135 ProSiteProfiles PPC domain profile profile. 1 135 IPR005175 -
Tpr3g0074 135 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 116 - -
Tpr3g0074 135 Gene3D - 2 133 - -
Tpr3g0074 135 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 124 - -
Tpr3g0074 135 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 116 IPR014476 GO:0003680
Tpr3g0074 135 CDD DUF296 3 105 IPR005175 -
Tpr3g0074 135 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 114 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0074 Tpr-Chr3 960465 960872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0074 1 111 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.167 7.74e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0074 - - cam:101509190 115.931