Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0071 ATGGCTGGAATGTGCTGTGGTGTTGTTGGTGAAGGAGACTCTCCGGCGAGTTCACGTCCATCATCCAGACGCCGGAATTTAGACTTGCTACCTTTCAAATACATCGCCGACATGGCGTCCGGTACTTCACGGAAACGCCGCCAAGCGGATCTCTGTAAGAACAACGATTTTGAAAGCTGTGATGACTCAAGCGATGACAAAAGTAAGAAGAACAGAACGGAATCCAAAGTAAGCGATTCAGACGATAAATCTTCAACGGAAGGTAATTCTGAAGATGGAGAGTTTCCAAAGTTTGGTGTTACTTCAGTTTGCGGTAGAAGAAGAGACATGGAAGATTCCGTTTCAGTTAAACCTTCTTTCTCTTCACAAGAACCGTTTCACTACTTCGGTGTTTTTGACGGTCACGGTTGCTCTCACGTTGCAACTATGTGTAAGGAACGTCTTCACGAAATCGTGAAGGAAGAAATCAACGAATCACAAGAGAATTTCGAGTGGAATAGCACTATGCAACAAGGATTTGCTCGCATGGACGATGAAGTTCAGAGATGGAATAGTAGCAGCCAAACCGTTACTTGCAGATGCGAGCTACAAACACCTCACTGCGACGCCGTTGGATCCACCGCCGTCGTCGCCGTTGTCACACCGGACAAAATCATCGTCTCAAACTGCGGTGACTCCCGCGCTGTTCTCTGCCGTAACGGCGTCGCAATCCCACTCTCCTCCGATCACAAGCCGGATCGACCCGACGAGTTGCTCCGAGTTCAAGCGGCAGGAGGGCGCGTGATCTACTGGGATGGTCCAAGAGTGCTTGGTGTACTCGCCATGTCTAGAGCCATAGGCGACAACTATTTAAAGCCATATGTGATATCAGAACCCGAGGTAACGGTAACGGAGAGAAAAGACGAAGATGAGTGCTTAATACTAGCGAGTGATGGATTATGGGATGTTGTTTCAAACGACACCGCATGTGGTGTTGTTAGGATGTGTTTGAAGGCACAAAAGCTGCCGTCGCCACCGGGTTCTCCTGGTAACAACGACGTGACGACAGATGGTTCCGATCGTGCATGTTCTGATGCGTCAATTTTGTTGACTAAGTTGGCTTTGGCAAGACATAGTTCGGATAATGTTAGTGTGGTGGTGATTGATTTAAGGAGAGATCAACGACAATTATCAAATTCCAACGTTAATTAA 1191 0.4752 MAGMCCGVVGEGDSPASSRPSSRRRNLDLLPFKYIADMASGTSRKRRQADLCKNNDFESCDDSSDDKSKKNRTESKVSDSDDKSSTEGNSEDGEFPKFGVTSVCGRRRDMEDSVSVKPSFSSQEPFHYFGVFDGHGCSHVATMCKERLHEIVKEEINESQENFEWNSTMQQGFARMDDEVQRWNSSSQTVTCRCELQTPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERKDEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPSPPGSPGNNDVTTDGSDRACSDASILLTKLALARHSSDNVSVVVIDLRRDQRQLSNSNVN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0071 396 PANTHER ALPHABET, ISOFORM E-RELATED 27 388 - -
Tpr3g0071 396 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Tpr3g0071 396 ProSiteProfiles PPM-type phosphatase domain profile. 97 383 IPR001932 -
Tpr3g0071 396 CDD PP2Cc 97 383 IPR001932 -
Tpr3g0071 396 SUPERFAMILY PP2C-like 97 384 IPR036457 -
Tpr3g0071 396 Gene3D - 92 392 IPR036457 -
Tpr3g0071 396 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 27 388 - -
Tpr3g0071 396 SMART PP2C_SIG_2 109 383 IPR001932 -
Tpr3g0071 396 Pfam Protein phosphatase 2C 98 375 IPR001932 -
Tpr3g0071 396 MobiDBLite consensus disorder prediction 41 98 - -
Tpr3g0071 396 MobiDBLite consensus disorder prediction 1 27 - -
Tpr3g0071 396 MobiDBLite consensus disorder prediction 43 90 - -
Tpr3g0071 396 SMART PP2C_4 87 381 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0071 Tpr-Chr3 896944 899346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0071 43 385 PP2C-type Phosphatase Gene Family AT2G29380 60.399 8.59e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0071 K14497 - gmx:100776356 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0071 3 896944 899346 Tpr4g3210 4 38084989 38087196 PCT