Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0065 ATGAACACAACTAGTCTCCTCCTTCTAACATCATCACTACTTCTTCTATCATGTGCCACGCACGTGCTCTCCGTAACACCATGTCCACCCTGCGGTAACACAACCGTCCCATTCCCACTTAGCACAACTCCCACATGCGGTGATCCGTTATACAAAATCCAGTGCACCGCTTCCGGTTCATTACTTTTCAACACAGTAAATAATTCCTACCCAATCCAATCCATAAACCCGAAAACACAACGGTTCATAATCCAACCCGCTTCAATAATCCCAAAAACCTGCACAACAACCGATAAAATCCACCAAGGAATAATCCTCAACAACACTCTTCCATTCAACATCACAAGCTCAAACACGATCGTGTATCTCAACTGTACACGTACGCTTCTTCAATCGCCGCTTAATTGCTCCGCCGCGAGTGCTTGCCACGCTTACATCGACGCTACTGATTCTATTTCCGCCTGTCAGACCGGTCCGGTTTGTTGTACTTATCGAACCGGTGGTTCGAGTAACTCGTATCAGATTCGTGTTAGGGATACGGGATGTAGTGCTTATTCGAGTTTTGTTAATCTTGATACTGGTCTTTCTGTGAACCGTTGGTCTAGACCGGGTTTAGAGATTCAGTGGTTATCGCCTAGAGAAACTGTTTGTGTGTCACAGAAGGATTGTGATGCTGCCACGTCGACTTGTGGGGTTGATGGTTCTTCGGGTAATGGGATCAAGCGGTGTTTTTGTAATGGAGAGCTTGTGTGGGACCCGGTTCAAGGGGTGTGTACTAAAAAAATTACTTGCTTTAATCCAGATGGGTGTGACTCGAGCAACAAGACAGCCATAATAGCAGGTACAACATGTGGAGTTGGAGCTGCAGTCATCCTAGCAATAATTGCATTTCTTCTATACAAACGCCACAAACGTATATTAGAAGCACAACGACGACTAGCCAAAGAGCGTGAAGGAATTCTAAACGCAAGTGGTGGAGGAAAAGCCGCCAAACTTTTCAGCGGCAAAGAGATAAAAAAAGCCACAAATGATTTCTCAGCAGATCGCCTCCTTGGCGTTGGCGGCTATGGCGAAGTCTACAAAGGCATTCTTTCAGACGGAACCAATGTAGCTGTTAAATGTGCTAAACTCGGAAACCCAAAAGGCACTGACCAAGTCCTCAACGAAGTTCGCATATTATGCCAAGTTAACCACAGAAACCTCGTTGGTTTACTTGGTTGCTGCGTCGAATTGGAGCAACCAATTTTGGTTTATGAGTTCATAGAAAATGGGACCCTTCTTGATCATTTAACAGGTCAAATGCCAAAGGGTCGGGCTTCACTTAATTGGAACAATCGTCTTCACATTGCTCGCGATACTTCTGAAGGTCTTTCTTACCTTCACTTCATGGCAGTACCACCAATTTACCATAGAGATGTTAAATCAAGTAACATTCTTCTAGATTTCAAGATGAACGCCAAGGTTTCGGATTTCGGGTTATCTCGTTTGGCTCAAACGGATATGAGTCATATCTCAACTTGTGCTCAAGGAACACTCGGGTATCTTGATCCTGAGTATTACAGAAACTATCAGTTAACTGATAAGAGTGATGTTTATAGCTTTGGAGTTGTGTTGCTTGAACTTTTGACGTCTCAGAAGGCGATAGATTTTAACAGGGCTTCGGATGATGTGAACTTGGCAGTTTATGTTCAGAGGATGATGGATGAAGAGAGGTTGATAGAGGTTATTGATCCTGTTTTGAAGGATGGAGCTAGTAATATAGAGCTTGATACTATGAAGGCTTTGGCTTTTTTGGCGTTGGGTTGTTTGGAGGAGAAAAGACAGAATCGACCTTCAATGAAAGAGGTGTCGGAGGAGATTGAGTATATTATCAGTATTGCTTCTGCGAAGGGAGTGGAGAAGTAG 1905 0.4388 MNTTSLLLLTSSLLLLSCATHVLSVTPCPPCGNTTVPFPLSTTPTCGDPLYKIQCTASGSLLFNTVNNSYPIQSINPKTQRFIIQPASIIPKTCTTTDKIHQGIILNNTLPFNITSSNTIVYLNCTRTLLQSPLNCSAASACHAYIDATDSISACQTGPVCCTYRTGGSSNSYQIRVRDTGCSAYSSFVNLDTGLSVNRWSRPGLEIQWLSPRETVCVSQKDCDAATSTCGVDGSSGNGIKRCFCNGELVWDPVQGVCTKKITCFNPDGCDSSNKTAIIAGTTCGVGAAVILAIIAFLLYKRHKRILEAQRRLAKEREGILNASGGGKAAKLFSGKEIKKATNDFSADRLLGVGGYGEVYKGILSDGTNVAVKCAKLGNPKGTDQVLNEVRILCQVNHRNLVGLLGCCVELEQPILVYEFIENGTLLDHLTGQMPKGRASLNWNNRLHIARDTSEGLSYLHFMAVPPIYHRDVKSSNILLDFKMNAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNRASDDVNLAVYVQRMMDEERLIEVIDPVLKDGASNIELDTMKALAFLALGCLEEKRQNRPSMKEVSEEIEYIISIASAKGVEK* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0065 634 Gene3D Transferase(Phosphotransferase) domain 1 421 631 - -
Tpr3g0065 634 Gene3D Phosphorylase Kinase; domain 1 308 420 - -
Tpr3g0065 634 PANTHER OS05G0318100 PROTEIN 17 629 - -
Tpr3g0065 634 SMART serkin_6 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0065 634 Pfam Protein tyrosine and serine/threonine kinase 348 619 IPR001245 GO:0004672|GO:0006468
Tpr3g0065 634 SUPERFAMILY Protein kinase-like (PK-like) 330 619 IPR011009 -
Tpr3g0065 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Tpr3g0065 634 CDD STKc_IRAK 351 621 - -
Tpr3g0065 634 Pfam Wall-associated receptor kinase galacturonan-binding 28 84 IPR025287 GO:0030247
Tpr3g0065 634 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 629 IPR045274 GO:0007166
Tpr3g0065 634 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Tpr3g0065 634 ProSiteProfiles Protein kinase domain profile. 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0065 Tpr-Chr3 723528 727589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0065 17 633 Receptor kinase-like Gene Family AT5G02070 52.194 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr3g0065 PK_Tyr_Ser-Thr 5.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0065 - - gmx:100305415 1035.79