Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0051 ATGAGTGGTCCATCGCGAGAAGAACAAGATTCAAATTCAAATTCAAAGGAAGAGGTAAAAGAAGACGAAGAAGGTAACCGGTTACTGGAACTAGAAGGTGAATCGGAAGAAGAAGAAGAAGCAGCGTATGAATCCGGCGAGAAAATCGTGGTGGTAGATTTCGAATTCGATTCAATAGACGATTCAGCCGTTCCACCTTTCTCATGGAAAAAGCTATGGATGTTTACTGGACCTGGATTCTTGATGAGTATAGCTTTTTTGGATCCAGGGAATTTGGAAGGGGATCTACAAGCTGGAGCAATTGCTGGTTATTCTCTTCTATGGTTGTTGATGTGGGCTACTTTTATGGGGTTATTGATTCAATTGCTTTCTGCTAGGGTTGGTGTTGCTACTGGTCGTCATTTAGCTGAGCTTTGTAGAGATGAGTATCCTAATTGGGCTCGTTATGTGCTTTGGTTTATGGCTGAACTTGCTTTGATTGGTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTATTCAGATTCTTAGTCGTGGTGTTTTGCCTCTTTGGGCTGGTGTTCTTATCACTGCTTCTGATTGCTTTTTCTTTCTCTTTCTTGAGAACTACGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATCGGTACCATGGCTCTTTCTTTTGCCTGGATGTTTGGTGACACAAAGCCTAGTGGAAAAGAGCTCGTCATGGGTATTTTGATTCCAAGACTTAGCTCAAAAACAATCCGTCAGGCTGTGGGCGTTGTGGGTTGTGTCATTATGCCTCACAATGTATTTCTGCATTCTGCTTTAGTGCAGTCAAGGAAGATTGATCCGAATAAGAAAGGCCGGGTGCAAGAGGCTCTTAATTACTATAATATTGAGTCAACAGTTGCACTTTCAGTCACCTTTATGATCAATCTGTTTGTCACAACAGTTTTTGCTAAGGGTTTTTATGGTACAGAGCAGGCAAATAGCATAGGATTGGTAAATGCAGGGCAGTATCTTGAGGAAAAATATGGAGGTGGACTCTTCCCTATTCTTTATATATGGGGGATCGGGTTATTGGCAGCTGGACAAAGTAGCACTATTACTGGCACGTATGCTGGGCAGTTCATAATGGGGGGTTTCCTCAACCTTCGATTAAAGAAATGGTTGAGAGCATTGATCACTCGGAGTTGTGCAATTGTGCCAACTATAATTGTAGCTATTGTTTATAATAGCTCAGAAGGCTCATTGGATGTTTTGAATGAATGGCTTAATGTGCTTCAGTCCGTACAAATTCCCTTTGCATTGATTCCCCTCCTCACGTTGGTCTCCAAAGAGCGTATCATGGGGTCCTTTAAGGTTGGGCCTGTTCTTGAGAGGGTGGCTTGGACGGTTGCTGCACTGATAATAGTAATTAATGGGTATCTCTTAGTAGATTTCTTCCTTTCTGAGGTGAACGGCGTACTATTTGCTTTTGTAGCCTGCTCTTGCACAGTTTCTTATATTGCATTCATTGTATATTTAATTTCACAAAGTGGAATTCTTCCTTCCGCTTGGGTTGATCGATTTCCAAAGGGTTTTTCTCTTACTGGGAATTAA 1596 0.4192 MSGPSREEQDSNSNSKEEVKEDEEGNRLLELEGESEEEEEAAYESGEKIVVVDFEFDSIDDSAVPPFSWKKLWMFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSRGVLPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIGTMALSFAWMFGDTKPSGKELVMGILIPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPNKKGRVQEALNYYNIESTVALSVTFMINLFVTTVFAKGFYGTEQANSIGLVNAGQYLEEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIVPTIIVAIVYNSSEGSLDVLNEWLNVLQSVQIPFALIPLLTLVSKERIMGSFKVGPVLERVAWTVAALIIVINGYLLVDFFLSEVNGVLFAFVACSCTVSYIAFIVYLISQSGILPSAWVDRFPKGFSLTGN* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0051 531 PRINTS Natural resistance-associated macrophage protein signature 151 177 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PRINTS Natural resistance-associated macrophage protein signature 181 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PRINTS Natural resistance-associated macrophage protein signature 206 227 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PRINTS Natural resistance-associated macrophage protein signature 255 278 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PRINTS Natural resistance-associated macrophage protein signature 362 381 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PRINTS Natural resistance-associated macrophage protein signature 390 407 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PRINTS Natural resistance-associated macrophage protein signature 424 443 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 32 519 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 PANTHER BNAC08G04640D PROTEIN 32 519 - -
Tpr3g0051 531 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 70 448 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 MobiDBLite consensus disorder prediction 10 27 - -
Tpr3g0051 531 MobiDBLite consensus disorder prediction 1 42 - -
Tpr3g0051 531 Pfam Natural resistance-associated macrophage protein 93 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr3g0051 531 MobiDBLite consensus disorder prediction 28 42 - -
Tpr3g0051 531 Hamap Divalent metal cation transporter MntH [mntH]. 59 480 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0051 Tpr-Chr3 552265 557694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0051 8 511 Inorganic Solute Cotransporters AT1G47240 80.512 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0051 K21398 - gmx:100791117 883.634