Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0048 ATGAATCTTTACTCAAAGCTATCAACAGGTCGAATCCAAATCAGCTTTATCTTTCTCCTCTTATCAATAATTTTCACTTGGAGATTCTTGTCTCTTGTTCCTTTATCCGTGTCCAAGAAGAAGAAGAAAAACAAGAACAAGAACAAAAACAACCTTATTAGTGATGAAACTGACAATGATGGTTCTGTTGTTTCTGAAGCCTACAAGTATCTTCTCTCATTAGAGAAAAAGAGAAGACCAATGATAGATTACATGGAGAAAGTTCAAACAGACATTGATCCAAAGTGGAGAGGAATATGTATTGATTGGGTAGTAAGCATTGTAGATTATTTCAACCTTCTTCCTGATACTCTTTATCTCGCTGTTTCGTGCATAGATAGGTTCCTATCTTTTAAACCTGTCAGCAGAGACCAGCTTCAATTGTTGTGTGTTTCATCGATGTTCATTGCATCGAAGTATGAAGATACTTTCCCACCCAATGTGGAAAACTTTTGGCGTGCTACCAACAATCAATACAGCAAAGAAGAGATTTTAGAGATGGAAATTGACATACTCAAGACCCTAAACTTTGACATGGGCAACCCCACTATTAAGACCTTTTTAAGGCAAGATTGGCAAATATGTTTGTTATTCTATTGTTGTTGCAAATGTCAATTTAAATATTTTACAAGACAGTATACTAATTATGTGTAG 693 0.3521 MNLYSKLSTGRIQISFIFLLLSIIFTWRFLSLVPLSVSKKKKKNKNKNKNNLISDETDNDGSVVSEAYKYLLSLEKKRRPMIDYMEKVQTDIDPKWRGICIDWVVSIVDYFNLLPDTLYLAVSCIDRFLSFKPVSRDQLQLLCVSSMFIASKYEDTFPPNVENFWRATNNQYSKEEILEMEIDILKTLNFDMGNPTIKTFLRQDWQICLLFYCCCKCQFKYFTRQYTNYV* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0048 230 Gene3D - 80 193 - -
Tpr3g0048 230 SMART cyclin_7 102 186 IPR013763 -
Tpr3g0048 230 SUPERFAMILY Cyclin-like 63 192 IPR036915 -
Tpr3g0048 230 Gene3D - 68 204 - -
Tpr3g0048 230 PANTHER CYCLINS 38 204 IPR039361 -
Tpr3g0048 230 PANTHER CYCLIN-A3-1-RELATED 38 204 - -
Tpr3g0048 230 Pfam Cyclin, N-terminal domain 67 192 IPR006671 -
Tpr3g0048 230 CDD CYCLIN 97 185 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0048 Tpr-Chr3 532892 534244 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0048 54 203 Core Cell Cycle Gene Families AT5G43080 52.667 1.09e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0048 K06627 - sspl:121757261 177.563