Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g0047 | ATGGCTAGTAGTAACAACCAAAGTGTCTCTTCATCTAGGAAGATGACATGGAAATATGATGTGTTTGTGAGCTTCAGAGGTGACACACGCAACAATTTCACTGATCACCTTTTTGGTGCTTTTCATAGAAAAGGCATTTTTGCCTTCAAGGATGATATAAAGCTCAAGAAAGGGGAAGATATATCATCTGACCTTCTAAAAGCCATTGAAGGATCTCAAATTTTGATTGTTATTTTCTCAAGAAACTATGCTTCTTCCACATGGTGTTTGCGGGAACTAGAAAAAATTGCTGAATGCAAAGTATTAGGACAACCTGTGCTACCTATTTTCTATGATGTGAGTCCATCTGAGGTACGAAAGCAAAGCGGAGATTTTGAAAAAGCCTTTATGGAGCATGAAGATAGGTTCAAAGGAAACTTAGAGGAAGTGCGAAGATGGAGGAGAGCTGTAACACAAGTAGCCAACCTCTCTGGTTATGATGTAAAGGATAAGCCACAATATGCAGAGATTGAAAAAATTATTAAAGTGGTAACAAGCTTATTGGGTCACAAATTTTCAACATTACCTGACGATATAGTTGGGATGCACTCACAAGTGGAAGAATTAGAAAACCTTATGAAGTTGGACTCCGATGATGATGTTCGAGTTGTAGGGATTTGTGGAATGAGTGGAATAGGGAAGACAACTCTTGGTAAAGCTTTGTATGGAAGAATCTCTAATCAATTTGAAGCTTGCTGCTATATTGATGATGTAAGTAAAACTTATGGAGGTGATGGCCCAGTAGGAGTGCAAAAGCAACTTCTTTGTCAAACTCTAGAAGAAGAAAATCTTCAGATATGCAATCATTATATGGCATCTAATTTGATTCGAACTAGGCTATGTGAAATAAAATCCCTTGTAATCCTTGATAATGTTGATCAAGTTGAACAACTGGATAAATTAGCCATGAAACGTGAGTGGCTAGGCACTGGGAGCAGACTTGTCGTAATTTCTAGAGATTGTCATATCTTGAGACAGCATGGAGTAGATGAAGTTTATCAAGTTGAACTCTTGGATCGTAGTAATGCCCTTCAATTGTTTTGTAGGAAAGCTTTCAAAAGTGATGATATCATGACCGGTTACACAGACTTGACAAATGATGTACTAAGATATGCCAATCGCCTTCCATTAGCAATTAAAGTGTTGGGCTCATTTTTGTATGGTCGAAATGTGTTAGAATGGAGAAGTGCATTGGAAAGATTAAGAGAGAAACCAATGGCAGGTATTACAGATGTACTCCGAATTAGTTTTGATGGGCTAGAGGATACAGAAAAGGATATATTTCTTGATATTGCTTGTTTTTTTAATCGAGAAATTGAGACATATGTGAAGAAACTGTTAGATATTCGTGGATTTCATCCTGAAATTGGTTTAGGAGTTCTCCATGATAAGTCATTCATTACTTGTGAGCGTGGGTTTATTTTTATGCATGGTTTATTCAAAGAACTTGGCAAGAGTATCGTTAGAGAAAAATCACCAAAAGAACCAAGAAAGTGGAATAGATTGTGGGACTACAAGGATGTCCACAAAGTTATGTCAGAAAACATGGAAACAAAAAACCTTGAAGCCATAGTTCTGCAGCCTGATGCTGATAACATTGATGAAATACAAGCAATGTCAACATTGAGGGCAGAAAGTTTAGCACAAATGAATCGCCTTAAATTGCTCATGCTGTGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTATATTGGGATAAATATCCTTTCACTTGTTTGCCATCGAGTTTTGAGCCGGATAAACTTGTTGAACTGTTCCTGCCTCATAGCAACATCAGGCAACTATGGGAGGGCACAAAGCCTCTTCATAATTTGACACGTCTTGATCTCTCTCACTCGAAAAATCTTATTATGATGCCAAGTTTTTTGGAGATTCCAAATCTCGAGTTGCTAGATCTTGAAGGATGCATAAAACTTGTGCAGATTGATCCATCCATTGGCATCTTAAGAAGGCTTTCCGAATTAAATTTGAAAAATTGTACAAATCTTGTTAGTATTCCTAACAAAATTTTTGGTCTGAGTTCCCTTAAATATCTAAATATCTCAGGCTGCCCAAATTTTTCGTTAGAGGGACAAAGAAAAATAGAACATTTGGAGATGCTTGAAAACAACAAAATTACTACCGAATACCAACCAATATCCTTCATCTACAAAGTTTTAATGCCGCCCTTCCGATTTTTAAATTTCCAAAAAAGTAGAGATCCAATTGGTTTATTGTTACCTTTGGTGTCTCTTTTGTCATGTTTACAACATCTAGACCTAAGTTTCTGCAATCTTGTTCAAATCCCTAATACTATTCGGTGGTTACACTGCTTAGAAACACTAAATTTGAGGGGTAACAATTTTGTTACATTACCTAGCTTCAAAGAACTTTTTAAACTTAGAGAATTGAACTTGGAGCACTGTAAGCAGCTTAAATATTTACCTGAACTCCCATCAAAAACTGTCTTGCCAGCAAGAGAAACATATTATATTGTTGTATTAAATATTTTTGGTTGCCCCAGTTTAACTGACATAGAATGTTGTTATAGAATGGTTTTATCTTGGATTATACAACTCCTTCAGGTGCACATGAAATCCGATCTCCCAATTAATCGGATTGAGATTGTCATTCCTAGAATTGAAATTCCAATGTGGTTTAATAAACAAAATGTGGGCAGTTCAATAAGCATGGAACCATTACCCAATATGGATGACCAGAATTTCATAGGCGTTGCTGTTGCTTGCTGCATAACACGTGTAGCACATGATGATCCAACTAGTTTAGGTTATGAAATGCCACCTAGGATTCGGTTTGATATTAAAGTTAAAGGAGGGTGGTGGTGTTGTTCCCATATTAACATACCTCAGGGAAAAGATCTCGTTACAGTTGATTTACAACACCTGTGTCTAATTTTTATCACTAGGGAATATCTTATTCGGTTTGATATTACTGAATTGGAAGTTGCTGTTCGCCATCCCTGTGATTCGCATGGTTTCCATTTGGAGGTAAAAAATTGTGGTTATCGTTGGATATTTCAGGAGGATCTGGAGAAATGA | 3120 | 0.367 | MASSNNQSVSSSRKMTWKYDVFVSFRGDTRNNFTDHLFGAFHRKGIFAFKDDIKLKKGEDISSDLLKAIEGSQILIVIFSRNYASSTWCLRELEKIAECKVLGQPVLPIFYDVSPSEVRKQSGDFEKAFMEHEDRFKGNLEEVRRWRRAVTQVANLSGYDVKDKPQYAEIEKIIKVVTSLLGHKFSTLPDDIVGMHSQVEELENLMKLDSDDDVRVVGICGMSGIGKTTLGKALYGRISNQFEACCYIDDVSKTYGGDGPVGVQKQLLCQTLEEENLQICNHYMASNLIRTRLCEIKSLVILDNVDQVEQLDKLAMKREWLGTGSRLVVISRDCHILRQHGVDEVYQVELLDRSNALQLFCRKAFKSDDIMTGYTDLTNDVLRYANRLPLAIKVLGSFLYGRNVLEWRSALERLREKPMAGITDVLRISFDGLEDTEKDIFLDIACFFNREIETYVKKLLDIRGFHPEIGLGVLHDKSFITCERGFIFMHGLFKELGKSIVREKSPKEPRKWNRLWDYKDVHKVMSENMETKNLEAIVLQPDADNIDEIQAMSTLRAESLAQMNRLKLLMLWNLNFSGSLNFLSSELGYLYWDKYPFTCLPSSFEPDKLVELFLPHSNIRQLWEGTKPLHNLTRLDLSHSKNLIMMPSFLEIPNLELLDLEGCIKLVQIDPSIGILRRLSELNLKNCTNLVSIPNKIFGLSSLKYLNISGCPNFSLEGQRKIEHLEMLENNKITTEYQPISFIYKVLMPPFRFLNFQKSRDPIGLLLPLVSLLSCLQHLDLSFCNLVQIPNTIRWLHCLETLNLRGNNFVTLPSFKELFKLRELNLEHCKQLKYLPELPSKTVLPARETYYIVVLNIFGCPSLTDIECCYRMVLSWIIQLLQVHMKSDLPINRIEIVIPRIEIPMWFNKQNVGSSISMEPLPNMDDQNFIGVAVACCITRVAHDDPTSLGYEMPPRIRFDIKVKGGWWCCSHINIPQGKDLVTVDLQHLCLIFITREYLIRFDITELEVAVRHPCDSHGFHLEVKNCGYRWIFQEDLEK* | 1040 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g0047 | 1039 | Gene3D | - | 15 | 178 | IPR035897 | - | |
Tpr3g0047 | 1039 | SMART | till_3 | 18 | 156 | IPR000157 | GO:0007165 | |
Tpr3g0047 | 1039 | Pfam | NB-ARC domain | 206 | 420 | IPR002182 | GO:0043531 | |
Tpr3g0047 | 1039 | SUPERFAMILY | L domain-like | 558 | 880 | - | - | |
Tpr3g0047 | 1039 | SMART | LRR_typ_2 | 796 | 821 | IPR003591 | - | |
Tpr3g0047 | 1039 | SMART | LRR_typ_2 | 676 | 700 | IPR003591 | - | |
Tpr3g0047 | 1039 | SMART | LRR_typ_2 | 773 | 795 | IPR003591 | - | |
Tpr3g0047 | 1039 | Pfam | Leucine Rich Repeat | 702 | 716 | IPR001611 | GO:0005515 | |
Tpr3g0047 | 1039 | Pfam | Leucine Rich Repeat | 776 | 791 | IPR001611 | GO:0005515 | |
Tpr3g0047 | 1039 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 9 | 159 | IPR035897 | - | |
Tpr3g0047 | 1039 | Pfam | C-JID domain | 899 | 1038 | IPR045344 | - | |
Tpr3g0047 | 1039 | Gene3D | - | 351 | 434 | IPR042197 | - | |
Tpr3g0047 | 1039 | Pfam | TIR domain | 18 | 177 | IPR000157 | GO:0007165 | |
Tpr3g0047 | 1039 | PRINTS | Disease resistance protein signature | 216 | 231 | - | - | |
Tpr3g0047 | 1039 | PRINTS | Disease resistance protein signature | 292 | 306 | - | - | |
Tpr3g0047 | 1039 | PRINTS | Disease resistance protein signature | 385 | 399 | - | - | |
Tpr3g0047 | 1039 | PRINTS | Disease resistance protein signature | 627 | 643 | - | - | |
Tpr3g0047 | 1039 | Gene3D | - | 179 | 344 | IPR027417 | - | |
Tpr3g0047 | 1039 | Gene3D | Ribonuclease Inhibitor | 752 | 872 | IPR032675 | - | |
Tpr3g0047 | 1039 | ProSiteProfiles | TIR domain profile. | 17 | 181 | IPR000157 | GO:0007165 | |
Tpr3g0047 | 1039 | SUPERFAMILY | "Winged helix" DNA-binding domain | 422 | 525 | IPR036390 | - | |
Tpr3g0047 | 1039 | Pfam | Leucine Rich Repeat | 608 | 627 | IPR011713 | - | |
Tpr3g0047 | 1039 | Gene3D | Ribonuclease Inhibitor | 532 | 738 | IPR032675 | - | |
Tpr3g0047 | 1039 | ProSiteProfiles | Leucine-rich repeat profile. | 798 | 819 | IPR001611 | GO:0005515 | |
Tpr3g0047 | 1039 | PANTHER | REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED | 187 | 1036 | - | - | |
Tpr3g0047 | 1039 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 187 | 1036 | IPR044974 | GO:0006952 | |
Tpr3g0047 | 1039 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 181 | 444 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g0047 | Tpr-Chr3 | 498729 | 508870 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g0047 | 19 | 814 | WRKY Transcription Factor Family | AT4G12020 | 29.657 | 6.89e-84 | 296 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g0047 | - | - | mtr:MTR_4g080777 | 1471.45 |