Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0035 ATGACCGTACGCTTTAGCCCTGATATGATAGGGAATTTAGCCGGCTTGCTTTTCTCCAACAACTCATGCATTGTATACGAGGGTGTATTGTTGGATCAACAAATTATAGCGGTGAAGAGAGTCAAGGAAGCTAATCAAGGTGAAGAGGAGTTTCTCGCCGAAGTTAGTAGCATTGGAAGACTTAACCACATGAACTTGATTGAGTTGTATGGTTATTGTGTAGAGCGAAAACATCAAATGCTTGTGTATGAGTACTTGGAAAATGGTTCTTTAGCGGAACATATAAAGTCTAGTAGATTGGATTGGGGAAAAAGGTTTGAAATAGCTTTAGGTACCGCGAAAGGTTTGGCCTATATTCACGAGGAGTGTTTGGAGTGGATTTTGCATTGCGATGTAAAACCGCATAACATACTTTTGGATTCTAACTATCAACCAAAGGTTGCAGATTTTGGTTTGTCGAAATCGAGAAATAGGAATGATCCTAAATTCTCTAGTTTTTCAAAGATACGAGGAACAAGAGGTTACATGGCACCTGAGTGGATTTTGAATCATTCTATAACATCTAAAGTTGATGTTTATAGCTACGGAATAGTTGTGTTGGAAATGATAACTGGAAAGAGTGCAACACAAGATGTTGATGTGGGAAATGGACAAGAGAAGCTAGGTTTGGTTATGTGGTTGAGAGAGAAAAGAAATGAAAGTATTTCATGGGTTAAAGAAATTATGGATCCCAACATTGAAGAAGGTTGTGATGAAAATGAAGTTGAAACTTTGGCTGAAGTGGCTTTACAATGTGTTGAAGAAGAGAAAGACAAGAGACCTACCATGAGTCATGTGGTAGAAGTGCTTCAGAAAATTAGCCGCGAAAATGATAATCAAGAATCAACAAGTAGTTAG 897 0.3813 MTVRFSPDMIGNLAGLLFSNNSCIVYEGVLLDQQIIAVKRVKEANQGEEEFLAEVSSIGRLNHMNLIELYGYCVERKHQMLVYEYLENGSLAEHIKSSRLDWGKRFEIALGTAKGLAYIHEECLEWILHCDVKPHNILLDSNYQPKVADFGLSKSRNRNDPKFSSFSKIRGTRGYMAPEWILNHSITSKVDVYSYGIVVLEMITGKSATQDVDVGNGQEKLGLVMWLREKRNESISWVKEIMDPNIEEGCDENEVETLAEVALQCVEEEKDKRPTMSHVVEVLQKISRENDNQESTSS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0035 298 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 22 288 - -
Tpr3g0035 298 CDD STKc_IRAK 24 286 - -
Tpr3g0035 298 Gene3D Transferase(Phosphotransferase) domain 1 86 298 - -
Tpr3g0035 298 SUPERFAMILY Protein kinase-like (PK-like) 21 284 IPR011009 -
Tpr3g0035 298 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0035 298 SMART serkin_6 18 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0035 298 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 22 288 - -
Tpr3g0035 298 Gene3D Phosphorylase Kinase; domain 1 2 85 - -
Tpr3g0035 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Tpr3g0035 298 PIRSF ILK 26 296 - -
Tpr3g0035 298 Pfam Protein kinase domain 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0035 Tpr-Chr3 363642 366376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0035 24 297 Receptor kinase-like Gene Family AT3G58690 40.636 1.54e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr3g0035 Pkinase 6.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0035 - - gmx:100792388 399.823