Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0033 ATGGTGAAGCTGATTTATAGCTTGCTTTTCTCCAACAACTCATGCATTGTATACGAGGGTGTATTGTTGGATCAACGAATTATAGCGGTGAAGAGAGTCAAGGAAGCTAATCAAGGTGAAGAGGAGTTTCTCGCCGAAGTTAGTAGCATTGGAAGACTTAACCACATGAACTTGATTGAGTTGTATGGTTATTGTGTAGAGCGAAAACATCAAATGCTTGTGTATGAGTACTTGGAAAATGGTTCTTTAGCGGAACATATAAAGTCTAGTAGATTGGATTGGGGAAAAAGGTTTGAAATAGCTTTAGGTACCGCGAAAGGTTTGGCCTATATTCACGAGGAGTGTTTGGAGTGGATTTTGCATTGCGATGTAAAACCGCATAACATACTTTTGGATTCTAACTATCAACCAAAGGTTGCAGATTTTGGTTTGTCGAAATCGAGAAATAGGAATGATCCTAAATTCTCTAGTTTTTCAAAGATACGAGGAACAAGAGGTTACACGGCACCTGAGTGGATTTTGAATCATTCTATAACATCTAAAGTTGATGTTTATAGCTACGGAATAGTTGTGTTGGAAATGATAACTGGAAAGAGTGCAACACAAGATGTTGATGTGGGAAATGGACAAGAGAAGCTAGGTTTGGTTATGTGGTTGAGAGAGAAAAGAAATGAAAGTATTTCATGGGTTAAAGAAATTATGGATCCCAACATTGAAGAAGGTTGTGATGAAAATGAAGTTGAAACTTTGGCTGAAGTGGCTTTACAATGTGTTGAAGAAGAGAAAGACAAGAGACCTACCATGAGTCATGTGGTAGAAGTGCTTCAGAAAATTAGCCGCGAAAATGATAATCAAGAATCAACAAGTAGTTAG 873 0.378 MVKLIYSLLFSNNSCIVYEGVLLDQRIIAVKRVKEANQGEEEFLAEVSSIGRLNHMNLIELYGYCVERKHQMLVYEYLENGSLAEHIKSSRLDWGKRFEIALGTAKGLAYIHEECLEWILHCDVKPHNILLDSNYQPKVADFGLSKSRNRNDPKFSSFSKIRGTRGYTAPEWILNHSITSKVDVYSYGIVVLEMITGKSATQDVDVGNGQEKLGLVMWLREKRNESISWVKEIMDPNIEEGCDENEVETLAEVALQCVEEEKDKRPTMSHVVEVLQKISRENDNQESTSS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0033 290 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 14 280 - -
Tpr3g0033 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Tpr3g0033 290 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0033 290 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 14 280 - -
Tpr3g0033 290 SUPERFAMILY Protein kinase-like (PK-like) 13 276 IPR011009 -
Tpr3g0033 290 Gene3D Phosphorylase Kinase; domain 1 6 77 - -
Tpr3g0033 290 PIRSF ILK 17 288 - -
Tpr3g0033 290 Pfam Protein kinase domain 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0033 290 ProSiteProfiles Protein kinase domain profile. 1 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0033 290 Gene3D Transferase(Phosphotransferase) domain 1 78 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0033 Tpr-Chr3 352080 353156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0033 16 289 Receptor kinase-like Gene Family AT3G58690 40.989 2.74e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr3g0033 Pkinase 4.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0033 - - gmx:100792388 400.979