Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0030 ATGCAAATTCAAGTCTTCCTCCTCTTTCTCTTATTCACTAAAACCATTTCATTAACATCAACAACAGATACACTCCCACAAGGCTCATCTCTTTCAGTTGAAAAACCAAATGACATCCTAATTTCATCCAACGGCGACTACTCCGCCGGTTTCATCCAAGTCGGAGACAACGCCTTTTGTTTCTCCGTCTACTTCACAAAATCCAAACAACCTACCGTTGTTTGGATGGCAAATCGAGACCAACCCGTTAATGGAAAAAATTCAAAACTCTCACTTTTTAACAACGGTAACCTCATTTTAACCGATGCAGAAAGAAAAAGAACACCAATTTGGTCCATTTCAACTTTCTCACCTTTTCCATTACAGCTTCAGCTTCAAAACAATGGTAACCTTGTACTTGAAACTTTACAAAAAACCGAAAAAAATACTAATGTTACTATCATTTGGCAAAGCTTTGATTTTCCAACCGATACTCTTCTTCCAGGCCAAGAACTTACAGAACACTCAAGCTTAGTTTCATCCAAAAGCAAAACAAATTTTTCCTCTGGTTTCTACAAACTTTATTTCGACAACGATAACGCTCTTCGTCTTTTATTCAAAGGTCCTTTGTTAGCTAGTGTCTATTGGCCATCACCTTGGAAATTACCAATTGATATGGGAAGATCAACATACAATGCTACAAAAATCGCGTTACTCGATTCTTTTGGTCATTTCACATCCTCTGATACGTATCAATTTCACACCACTGATTATCCTAATAAATTTCATAGATTACTCAAAATGGATCACGACGGTAACTTACGTGTTTATAGTTTCAATGAGAAAATGAAGACATGGGAAGTAACATGGCAAGCTACTCAAGAACCATGTGAGGTTCATGGTATTTGTGGAGAAAATAGCATGTGTAGTTATGATCATGTTATTGGAAGAACATGTTTTTGTTTGAAAGGTTACAAGTTGAAGAATCCTCATGATTGGTCACAAGGGTGTGAGCCTGAGTTTAAACCTGCTGATCTTTCGTGTAATCGAGGTGTGTCTTTCGGTTTTCTTCGTCTTCAAAACACGGAGTTTTTTGGCTATGATTTGAATGTAACAAAAGTTACAAGCTTGAAACAATGTCAAGATTTATGTTTGGGTCTTTGTGAGAGATGCAAAGGTTTTCAATTCAAATTCAATAGAGAATCTACTTATGATTGTTTTACTAAAACATTGTTGGTCAATGGAAGAGATTCTCATAATATTGATGGTGATGTTTTCTTGAAATTGCCCAAAAATACTTTGTTATCTTCCACTATGCCACTTAAACATTTACCTTTGAATTGTTCCATTGATTTGTCTCAACCATTGAATAGACTCTATGAAAAACCAAGTAAAAACTCAACTTTGAGTTTCTTAGTTTGGTTTGCATTAGGATTTGGTGTGTTTGAGATAACCATGATTTTCATTGTGTGGTTCTTTTTGTTTAGAACCAATAAAAACAATGATAATGTTGATCAAGTTCAAAGACATCTTCTTTCGGCAACGGGCTTTCAAAAATTTTCGTATTCAGAACTAAAAACCGCGACAAAAGGGTTTACAAAAGAGATCGGTCGAGGAGGAGGAGGAATTGTTTACAAAGGTATACTCGATGATGATCGTGTTGCGGCTGTTAAATGCTTAAATGAAGCTCATCAAGGCGAAGCGGAATTTCTAGCCGAAATAAGCACAATTGGTATGTTGAACCATATGAATTTGATTGATATGTGGGGATATTGTGTTGAAAGGAAACATAGGATTTTGGTTTATGAGTATATGGAACATGGTTCTTTAGCTGAAAATCTTTGTTCTAATTCACTTGATTGGAACAAGAGATTTAATGTAGCTATTGGAACAGCTAAAGGTTTGGCTTATTTACATGAAGAGTGTTTGGAATGGGTTTTACATTGTGATGTGAAGCCTCATAATATTTTACTTGACACAAAATTTCAACCAAAAGTAGCAGATTTTGGATTATCAAAACTTTTGAATAGAGATGATCGCGATAGTTCAGTTTTTTCACGAATTCGAGGAACAAGAGGTTATATGGCACCTGAATGGGTTTATAATCTTAAAATTACTTCTAAAGTTGATGTTTATAGTTATGGAATTGTTTTGCTTGAAATGGTGAGTGGTAAAAGTCCAATGGAAATTCATAGTCTTGATAATAGTGGAGGTATAGAGCATCATAGAATGGTAACTTGGGTTATGGAAAAAGTGAAAAATGCTCCTACTACTATGTTTTGGATTGAGGAGATTGTTGATGGTAATTTGGAAGGAAAATATGATGTTAATCAAGTTGAGAATTTGGTTAAAGTTGCTTTGAAGTGTGTCAAAGATGATATGAATGAAAGACCTTCAATGAGTCAAGTAGTTGAGATGCTTCTTGAGTCCAATGAAAGAAGAGGCACCCCTCGTTAG 2436 0.353 MQIQVFLLFLLFTKTISLTSTTDTLPQGSSLSVEKPNDILISSNGDYSAGFIQVGDNAFCFSVYFTKSKQPTVVWMANRDQPVNGKNSKLSLFNNGNLILTDAERKRTPIWSISTFSPFPLQLQLQNNGNLVLETLQKTEKNTNVTIIWQSFDFPTDTLLPGQELTEHSSLVSSKSKTNFSSGFYKLYFDNDNALRLLFKGPLLASVYWPSPWKLPIDMGRSTYNATKIALLDSFGHFTSSDTYQFHTTDYPNKFHRLLKMDHDGNLRVYSFNEKMKTWEVTWQATQEPCEVHGICGENSMCSYDHVIGRTCFCLKGYKLKNPHDWSQGCEPEFKPADLSCNRGVSFGFLRLQNTEFFGYDLNVTKVTSLKQCQDLCLGLCERCKGFQFKFNRESTYDCFTKTLLVNGRDSHNIDGDVFLKLPKNTLLSSTMPLKHLPLNCSIDLSQPLNRLYEKPSKNSTLSFLVWFALGFGVFEITMIFIVWFFLFRTNKNNDNVDQVQRHLLSATGFQKFSYSELKTATKGFTKEIGRGGGGIVYKGILDDDRVAAVKCLNEAHQGEAEFLAEISTIGMLNHMNLIDMWGYCVERKHRILVYEYMEHGSLAENLCSNSLDWNKRFNVAIGTAKGLAYLHEECLEWVLHCDVKPHNILLDTKFQPKVADFGLSKLLNRDDRDSSVFSRIRGTRGYMAPEWVYNLKITSKVDVYSYGIVLLEMVSGKSPMEIHSLDNSGGIEHHRMVTWVMEKVKNAPTTMFWIEEIVDGNLEGKYDVNQVENLVKVALKCVKDDMNERPSMSQVVEMLLESNERRGTPR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0030 811 Gene3D Phosphorylase Kinase; domain 1 488 597 - -
Tpr3g0030 811 ProSiteProfiles Bulb-type lectin domain profile. 16 146 IPR001480 -
Tpr3g0030 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Tpr3g0030 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 212 IPR036426 -
Tpr3g0030 811 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 1 805 - -
Tpr3g0030 811 CDD PAN_AP_plant 338 423 - -
Tpr3g0030 811 PANTHER OS07G0415500 PROTEIN 1 805 - -
Tpr3g0030 811 SMART serkin_6 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0030 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Tpr3g0030 811 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Tpr3g0030 811 Pfam Protein kinase domain 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0030 811 Gene3D - 17 153 IPR036426 -
Tpr3g0030 811 CDD B_lectin 40 155 IPR001480 -
Tpr3g0030 811 CDD STKc_IRAK 529 802 - -
Tpr3g0030 811 Gene3D Transferase(Phosphotransferase) domain 1 598 809 - -
Tpr3g0030 811 ProSiteProfiles PAN/Apple domain profile. 341 423 IPR003609 -
Tpr3g0030 811 Pfam S-locus glycoprotein domain 240 321 IPR000858 GO:0048544
Tpr3g0030 811 ProSiteProfiles Protein kinase domain profile. 523 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0030 811 Pfam D-mannose binding lectin 72 168 IPR001480 -
Tpr3g0030 811 SMART blect_4 31 155 IPR001480 -
Tpr3g0030 811 SUPERFAMILY Protein kinase-like (PK-like) 502 800 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0030 Tpr-Chr3 296406 299078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0030 319 800 Receptor kinase-like Gene Family AT5G45780 34.000 1.16e-66 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr3g0030 Pkinase 1.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0030 - - gmx:100816469 1124.38