Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0025 ATGGATCAACACCATAACCAAATGTTCCTTTTAGATACCTTGTACTGTTCAGAACAACATTGGGAGGAAGAACAAGAACAAGAACAAGATGATGAGTACGATAATGTTTCCTTAAACAACACAACAACAATAAACTACTCAACTGCTTCTACGTTCTTAGAACAAGACATGTTTTGGGACAACGAAGAACTTAAATCACTTCTTTCAAAAGAACAACAAAACCCTCTTTACATTTTTCTCCAAACAAACCCTGTTTTAGAAACTGTTCGTAGAGAATCTATTGAATGGATTCTGAAAGTGAATGCTCATTACTCATTTTCACCTCTCACAACTCTTCTTGCTGTTAACTACTTTGATAGATTTCTCTTCAGCTTTCGTTTTCAGAATGAGAAACCATGGATGACTCAACTTGCTGCTGTTGCTTGTCTTTCTCTTGCTGCTAAAATGGAAGAAACCCATGTTCCTCTTTTACTAGATCTTCAAGTTGAAGAAAGTAGATACTTGTTTGAAGCTAAAACGATTAAAAAGATGGAGATTTTGGTACTTTCAACACTTGGGTGGAAGATGAATCCAGCAACACCACTTTCATTCATTGATTATATTATAAGAAGACTTGGATTGAAAGATCGTCTTTGTTGGGAGTTTCTTAAGAGATGTGAAGGTGTTCTTCTTTCTGTCATTAGATCAGATTCTAAGTTTATGAGTTACCTACCTTCTGTTTTGGCAACTGCTACAATGATTCATGTTTTCAACAGTGTGGAGCCTAGTTTAGGTGATGAATACCAAAATCAGCTTCTTGGTATTCTTGGAATCAATAAAGACATGGTGGATGAATGTTGCAAGCTGATTTTGAAACTATGGTCAGGATATGAGGAGGGGAATGAATGCAACAAACGTAAGTTTGTGTCAATAATACCAAGTAGTCCAAATGGAGTAATGGATGTGTCTTTTAGTTGTGAAAATTCCAATGATTCATGGGCTATAGCAACAACAGCAGCAACTTCAGTTTCATCTTCACCAGAGCCTTTATCTAAGAAGATTAGGACTCAAGAACAGCTTCTATTAAACTCTTCAAAATCTGATTTTCTAAGCATTCCTCATTAA 1104 0.3578 MDQHHNQMFLLDTLYCSEQHWEEEQEQEQDDEYDNVSLNNTTTINYSTASTFLEQDMFWDNEELKSLLSKEQQNPLYIFLQTNPVLETVRRESIEWILKVNAHYSFSPLTTLLAVNYFDRFLFSFRFQNEKPWMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILVLSTLGWKMNPATPLSFIDYIIRRLGLKDRLCWEFLKRCEGVLLSVIRSDSKFMSYLPSVLATATMIHVFNSVEPSLGDEYQNQLLGILGINKDMVDECCKLILKLWSGYEEGNECNKRKFVSIIPSSPNGVMDVSFSCENSNDSWAIATTAATSVSSSPEPLSKKIRTQEQLLLNSSKSDFLSIPH* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0025 367 PANTHER CYCLINS 7 348 IPR039361 -
Tpr3g0025 367 SMART cyclin_7 95 183 IPR013763 -
Tpr3g0025 367 CDD CYCLIN 90 182 IPR013763 -
Tpr3g0025 367 Gene3D - 74 190 - -
Tpr3g0025 367 Pfam Cyclin, C-terminal domain 193 297 IPR004367 -
Tpr3g0025 367 SUPERFAMILY Cyclin-like 57 190 IPR036915 -
Tpr3g0025 367 Pfam Cyclin, N-terminal domain 70 190 IPR006671 -
Tpr3g0025 367 Gene3D - 67 281 - -
Tpr3g0025 367 SUPERFAMILY Cyclin-like 174 299 IPR036915 -
Tpr3g0025 367 PANTHER CYCLIN D3.1 PROTEIN 7 348 - -
Tpr3g0025 367 SMART Cyclin_C_2 192 321 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0025 Tpr-Chr3 250493 252736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0025 9 286 Core Cell Cycle Gene Families AT4G34160 51.079 1.36e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0025 K14505 - aprc:113874132 457.603