Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0022 ATGGTGCTAAACAAAAACCACTCAAACATTTTCATCAGCCTCTCACTTTTACTACTACTACTCTCAACTACTACTACATCCTCCAAACTCAAACTCAAAAATATCACACTCTCAGATCCTACTTCACTATTATCATTCAAATCAAAAGCTGACATTAACAACCACCTCAACTTCACCACCAAAACCTCTTTCTGCAACTGGCAAGGTGTTCAATGCAACAACCAACACAAAATTATTCGTCTCGTTCTCCGTAATTTAGATCTCGCCGGCGTTTTCTCTCCACACACATTATCCAATCTCGATCAACTCCGTGTACTCAGTCTCCAGAACAACTCCCTCACCGGAACAATTCCTAATCTCTCCGGTCTCTTCAATCTCAAAACACTATTCCTTGATAATAACCACTTCACTGGTTCTATTCCTCTTTCTATTTTCTCTCTTCATAGACTCAAAACCTTGGATTTCTCTCACAACAATCTCTCCGGAACTATTCCTATAGATTTCATTAACCTTGATCGTCTTTACTATCTTCGTTTAAGCTTTAATGCTTTCAACGGTAGTGTTCCTTCTTTTAATCAGTCTTCTCTTCGAATATTTGATGTTTCTAGCAACAATCTCTCCGGTGCAGTTCCGTTAACCACCACGCTATCTCGTTTTCAACCGTCTTCTTTTGCTTTAAATCCTAATCTCTGTGGAGAGATTATTCGGAGAGAATGTCGTCCGAGTGTGCCGTTTTTCGCTCCGACGACACCGCCGACGGTTGGACTTAACCAAAGTGCGAAGGTTCACGGATTAATCCAGCAGCCGTATCAGAAGAAACACGATCGGAGAGCTGTGATTATAGGATTCTCTACTGGAATTTTTGTTCTGTTAGTCTCGTTAGCGTGTTTTGCTATAGTGGTTAAGAAACAGATCAGAAATAAGAAGAAAGGTAAAGGCTCTTCTGGTTCGAGTGTGATGGCTTCAGATGCGGCGGCGGCGACAGCGGAAGCAGCGGTTGTGATGCAAATGGAGCAAGAAAGAGAATTAGAAGAGAAAGTTAAGAGAGCACAAGTTGCAAAGAGTGGGAGTTTAATATTCTGTGCGGGTGAATCGCAGGTGTATACGCTGGACCAGTTGATGAAAGGATCTGCGGAGCTTTTAGGTAGAGGGTGTTTGGGAACAACTTATAAAGCAGTGCTTGATAACCGTTTGATTGTAACGGTAAAGCGTCTTGATTGTGGGAAAATGGGTGTGCACGTTAACAAGGATGTATTTGAGCGTCACATGGAATCAGTTGGTGGTCTTCGTCATCCAAATTTGGTTCCTCTAAGAGCTTATTTTCAGGCTAATCAGGAGAGATTAATTATCTATGATTATCAGCCTAATGGCAGTTTATACTCCCTCATACATGGTTCCAAATCAAGCAGGGCAAGGCCATTACATTGGACATCATGCTTAAAAATAGCAGAGGACGTAGCACAAGGGCTTTCCTACATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAAATCCACCAATGTTCTCCTAGGACCCGATTTTGAGGCTTGCATCACAGATTACTGCTTGTCTGTGTTAACCAACCCATCTACCTTTGATGAGGTTGGTGATTCTGCACCCTATAGAGCTCCAGAGACTCGCAATCCAAATCACCAGCCAACCACCAAATCCGACGTTTATGCTTATGGTATTTTGTTGCTAGAGCTTCTGACCGGGAAGTATGCTTCTGAGCTCCCATTCATGGTTCCTGGGGATATGTCAAGATGGGTGAGATCTATCAGGGATGACAATGGGAGCGAAGACAATAGAATGGATATGCTTCTTCAGGTTGCTACAACTTGTAGCTTGATCTCTCCGGAGCAGAGGCCCACAATGTGGCAGGTCTTGAAGATGTTACAGGAAATCAAAGAGATTGTACTATTGGAGGATAGTGAATTGGACCTAAGCAGTAATAATGTCATTGCCATGTCTTAG 1977 0.4289 MVLNKNHSNIFISLSLLLLLLSTTTTSSKLKLKNITLSDPTSLLSFKSKADINNHLNFTTKTSFCNWQGVQCNNQHKIIRLVLRNLDLAGVFSPHTLSNLDQLRVLSLQNNSLTGTIPNLSGLFNLKTLFLDNNHFTGSIPLSIFSLHRLKTLDFSHNNLSGTIPIDFINLDRLYYLRLSFNAFNGSVPSFNQSSLRIFDVSSNNLSGAVPLTTTLSRFQPSSFALNPNLCGEIIRRECRPSVPFFAPTTPPTVGLNQSAKVHGLIQQPYQKKHDRRAVIIGFSTGIFVLLVSLACFAIVVKKQIRNKKKGKGSSGSSVMASDAAAATAEAAVVMQMEQERELEEKVKRAQVAKSGSLIFCAGESQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDCGKMGVHVNKDVFERHMESVGGLRHPNLVPLRAYFQANQERLIIYDYQPNGSLYSLIHGSKSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSTNVLLGPDFEACITDYCLSVLTNPSTFDEVGDSAPYRAPETRNPNHQPTTKSDVYAYGILLLELLTGKYASELPFMVPGDMSRWVRSIRDDNGSEDNRMDMLLQVATTCSLISPEQRPTMWQVLKMLQEIKEIVLLEDSELDLSSNNVIAMS* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0022 658 Pfam Leucine rich repeat 125 183 IPR001611 GO:0005515
Tpr3g0022 658 Pfam Protein tyrosine and serine/threonine kinase 379 633 IPR001245 GO:0004672|GO:0006468
Tpr3g0022 658 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 645 - -
Tpr3g0022 658 Gene3D Ribonuclease Inhibitor 37 192 IPR032675 -
Tpr3g0022 658 ProSiteProfiles Protein kinase domain profile. 375 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0022 658 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 645 - -
Tpr3g0022 658 Gene3D Ribonuclease Inhibitor 193 243 IPR032675 -
Tpr3g0022 658 SUPERFAMILY Protein kinase-like (PK-like) 379 634 IPR011009 -
Tpr3g0022 658 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Tpr3g0022 658 Gene3D Phosphorylase Kinase; domain 1 342 453 - -
Tpr3g0022 658 SUPERFAMILY L domain-like 39 231 - -
Tpr3g0022 658 Gene3D Transferase(Phosphotransferase) domain 1 455 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0022 Tpr-Chr3 224092 228261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0022 39 653 Receptor kinase-like Gene Family AT5G43020 58.136 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr3g0022 PK_Tyr_Ser-Thr 6.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0022 - - cam:101511242 1067.37