Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0017 ATGAGCACTCCTTCTCTTAAACTTGTTTCTCAATGTTTTATCAAACCATATCCCCCAATCGAAAACTCAAAACAAATATGCTACTTAGCACCATGGGATATTATTATGTTATCTTCGCACTATATCCAAAAGGGTCTTCTCTTCAAAAAACCAACATCATCATCATCACTAAACCAACAACATTTCATTGAGAATCTAGTGGACAAACTCAAACACTCCCTTTCTCTCACACTTTTCCATTTCTACCCCCTCTCAGGTCGTCTTGTTACACAGAAAACCGAAGATCCTCCATCTTACAATGTTTTTGTTGATTGCAAAAACAGTGATGGAGCTAAATTTATCCATTCAACTTTAGATATCACCATAAATGATATCTTGTCACCTGTTGACGTCCCGCCTATTGTTCAATCATTTTTTGACCACCACAAAGCAGTTAACCATGATGGTCACACCATGTCTTTGTTGTCTATTCAAGTAACTGAATTAGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCATTCTATTGGTGATGGAACTGCTTATTGGAATTTCTTTAACACATTTTCTGAGATATTTCAAAATGGTGCTAATCTTCTTCCAATTACACATCAACCTATCCACAATAAATGGTTTCCAGAAGGTTATGGTCCGATTATCAACCTTCCTTATAAACATCACGACGAGTTTATTCTTAGATATGAAGCACCCATTTTGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCTATAGCAAAACTAAAAGCAAAGGCTAATAAAGAATCTAATACAGACAAAATATCTTCATTTCAATCTTTATCAGCATTAGTTTGGAGATCTATAACTCGTGCACGTCAGCTACAACATGATCAGAAAACGATTTGCAAGTTGGCTATAAACAACCGAACGAGAATGAAACCATCGCTTCCAAAGGAATATTTTGGAAGTTTAGCTTACGCAGTGAGGACTGAAACAACGGTAAAGGAATTACTAGAGAACGATCTAGGATGGGCAGCATGGAAGATTCATCTGGCCGTTGCAAATTATGATGACAAAGTTGTGCGTCAATTAGTGAACGAGTGGTTACAATCTCCAATTGTGCCTCGAATGGACATGTTGTTTGAAGCTAATATCGTGTTGATGGGTAGTTCACCTAGGTTTGTTATGTATGAGAATGAATTTGGAATGGGAAAAGCTCTAGCTGTTAGAAGTGGGTATGCTAACAAGGCTGATGGAAAAATAACATCATATCCAGGACAAGGAGGCGGGAGCATTGATCTTGAAGTGTGTCTTTCACCTGATAAAATGAAGGCACTGGAAACTGATGAAGAGTTCATGAGTTCAACTTCAGTATTTAATCATTTGTTCTATCTTTGA 1377 0.3725 MSTPSLKLVSQCFIKPYPPIENSKQICYLAPWDIIMLSSHYIQKGLLFKKPTSSSSLNQQHFIENLVDKLKHSLSLTLFHFYPLSGRLVTQKTEDPPSYNVFVDCKNSDGAKFIHSTLDITINDILSPVDVPPIVQSFFDHHKAVNHDGHTMSLLSIQVTELVDGVFIGCSMNHSIGDGTAYWNFFNTFSEIFQNGANLLPITHQPIHNKWFPEGYGPIINLPYKHHDEFILRYEAPILRERIFHFSAESIAKLKAKANKESNTDKISSFQSLSALVWRSITRARQLQHDQKTICKLAINNRTRMKPSLPKEYFGSLAYAVRTETTVKELLENDLGWAAWKIHLAVANYDDKVVRQLVNEWLQSPIVPRMDMLFEANIVLMGSSPRFVMYENEFGMGKALAVRSGYANKADGKITSYPGQGGGSIDLEVCLSPDKMKALETDEEFMSSTSVFNHLFYL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0017 458 Gene3D - 6 218 IPR023213 -
Tpr3g0017 458 Gene3D - 234 441 IPR023213 -
Tpr3g0017 458 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 448 - -
Tpr3g0017 458 Pfam Transferase family 10 446 - -
Tpr3g0017 458 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0017 Tpr-Chr3 170425 172043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0017 48 440 Monolignol Biosynthesis Gene Families AT5G48930 26.442 1.70e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0017 - - gmx:100792511 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0017 3 170425 172043 Tpr4g2463 4 26331204 26333051 PCT