Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0016 ATGAACACCCCTTCTCTTAAACTTGTTTCTGAATGTTTTATCAAACCATATCCTCCAATCGAAGACTCAAAGCAAATATGCTATTTAGCACCTTGGGATATTGCTATGTTATCTACACACTATATCCAAAAGGGTCTTATCTTCAAAAAACCAACATCATCATCACTAAACCAACAACATTTCATTGAGAATCTAGTTGACAAACTCAAACACTCCCTTTCTCTCACACTTTTCCATTTCTACCCCCTCTCAGGTCGTCTTGTTACACAGAAAACCGAAGATCCTCCATCTTACAATGTTTTTGTTGATTGCAAAAACAGTGATGGAGCTAAATTTATCCATTCAACTTCAAATATCACCATCAATGATATCCTCTCACCCGTTGACGTACCGCCGATTGTTCAATCATTTTTTGACCACCATAGAGCCACTAACCATGATGGTCACACCATGTCTTTGTTGTCTATTCAAGTAACTGAATTAGTGGATGGTGTTTTCATAGGTTGTTCCATGAATCATTCTATTGGTGATGGAACTGCTTATTGGAGTTTCTTCAACACATTTTCTGAGATATTTCAAAATGGTGCTACTAATCTTCATCCAATTTCACATCCACCTATACATAACAAATGGTTTCCACAAGGTTATGGTCCAATTATCAACCTTCCTTTCAAACATCACGACGAGTTTATTCGTAGTCATGAATCACCCATTTTGAGAGAGAGGATCTTTCATTTTTCAGCGGAGTCTATAGCGAAGCTTAAAGCAAAGGCTAATGAAGAGTCTAAGACAACGAAAATATCTTCTTTCCAATCTTTATCAGCATTAGTTTGGAGGTCTGTAACTCGTGTGCGCCAACTATCACTTGATAAGAAAACGAGTTGTAAAATGGCTATAAACAATCGAACGAGAATGGAGCCGTCTCTTCCTAAGGAATATTTTGGGAATTCAATTTACGCGGTGAGTACTGAAACAACGGTAGGAGAATTACTGGAGAACGATCTAGGATGGGCAGCATGGAAGATTCATCAAACTATTGCAAATTATGACGACAAAATTGTACGTGGATCATTGAACCAGTGGTTACAATCTCCAATAGTGTTTCGAATGGACATGATGGTTGATCCTTATACCGTGTTGATGGGTAGTTCACCTAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAAGCTTTAGCAGTTAGAAGCGGGTATGCTAACAAATTTAATGGAAAAATAACATCATATCCAGGACTAGAAGGAGGAGGAAGCATAGATCTTGAAGTGTGTCTTGCACCGGATATAATGATGGCGCTGGAAAATGATAATGAGTTCATGAGTTCAACTTCGGTGTTTAATCTCTTGTTCTAG 1374 0.3792 MNTPSLKLVSECFIKPYPPIEDSKQICYLAPWDIAMLSTHYIQKGLIFKKPTSSSLNQQHFIENLVDKLKHSLSLTLFHFYPLSGRLVTQKTEDPPSYNVFVDCKNSDGAKFIHSTSNITINDILSPVDVPPIVQSFFDHHRATNHDGHTMSLLSIQVTELVDGVFIGCSMNHSIGDGTAYWSFFNTFSEIFQNGATNLHPISHPPIHNKWFPQGYGPIINLPFKHHDEFIRSHESPILRERIFHFSAESIAKLKAKANEESKTTKISSFQSLSALVWRSVTRVRQLSLDKKTSCKMAINNRTRMEPSLPKEYFGNSIYAVSTETTVGELLENDLGWAAWKIHQTIANYDDKIVRGSLNQWLQSPIVFRMDMMVDPYTVLMGSSPRFNMYGNEFGMGKALAVRSGYANKFNGKITSYPGLEGGGSIDLEVCLAPDIMMALENDNEFMSSTSVFNLLF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0016 457 Gene3D - 6 219 IPR023213 -
Tpr3g0016 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 449 - -
Tpr3g0016 457 Pfam Transferase family 11 447 - -
Tpr3g0016 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 449 - -
Tpr3g0016 457 Gene3D - 226 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0016 Tpr-Chr3 162860 164517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0016 48 442 Monolignol Biosynthesis Gene Families AT5G48930 27.470 6.15e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0016 - - gmx:100787228 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2463 4 26331204 26333051 Tpr3g0016 3 162860 164517 PCT