Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0015 ATGAGAACTCCTTCTCTTACACTTGTTTCTGAATCTTTCATCAAACCATATCCCTCAATGGAAAACTCAAAACAAATATGCTATTTAGCACCTTGGGATATTGCTATGTTATCTACACACTATATCCAAAAGGGTCTCCTCTTCAAAAAACCAACATCATCATCATCACTAAACCAACAACATTTCATTGAGAATCTAGTTGACAAACTCAAACACTCCCTTTCGCTCACACTTTTCCATTTCTATCCTCTCTCAGGTCGTCTTGTTATCAAGAAAATCGAACATCCTCCTTCTTACTCTGTTTATATAGATTGCAAAAACAGTCTTGGTGCTAAATTTATTCATGCAACTTTAGATGTCACCATCAATGATATTCTCTCACCTATCGATGTCCCACACATTGTTCATTCCTTTTTTGATCACCACAAAGCACTCAGCCATGATGGTTGCACCATGTCTTTGTTATCTATTCAAGTCACTGAATTATTAGATGGTGTTTTCATAGGTTGTTCCATGAACCATTGCACTGGGGATGGAACTGCTTATTGGAATTTCTTTAACACATTTTCCAAGATATTTCAAAATGATAATCACGTTTTCGGTCCCATTTCACATCAACCTATCAATACTAGATGGTTTCCAGAAGGTTATGGTCCAATTATCAACCTCCCTTTTAAACACGAGGCCGAGTTTATTTATAGATATGATGAAACAGCTAATTTTAGAGAGAGAATATTTCATTTTTCAGCAGAGTCTATAGCGAAACTTAAAGCAAAAGCTAACAAAGAATCTAATACAAATGAAATCTCTTCGTTTCAATCTTTATCAGCATTAGTTTGGAGATCTATAACTCGTGCACGTCACTTAGAACATGATAAGAGAACGACTATTAAGTTGGCTGTAAACAATCGAACAAGAATGAAACCGTCTCTTCCTAACGAATATTTTGGGAATTCAATTTCTGCAACGAGTACTGAAACGACAGTAGGGGAGTTGTTGGAGAATGATCTAGGATGGGCAGCATGGAAGATTCACATGGCCATTATAAATCATGATGATAAAGTGGTGAGAAATTGGGTTGAAGAGTGGTTACATTCACCTTTTGTGTATAAAACAGATCTGTTCTTTGATCCTTATACTGTGATGATGGGTAGTTCACCTAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAAGCTTTGGGTGTTAGAAGCGGGTATGCAAACAAATTTGATGGAAAAATAACATCATATCCAGGTCAAGAAGGAGGAGGGAGCATTGATCTTGAAGTGTGTCTTTCACCAGATAAAATGATGGCGCTAGAAACCGATGAAGAGTTCATGAGTTCAACTTCGGTGTTTAATCCGTTGTTCTAG 1380 0.3674 MRTPSLTLVSESFIKPYPSMENSKQICYLAPWDIAMLSTHYIQKGLLFKKPTSSSSLNQQHFIENLVDKLKHSLSLTLFHFYPLSGRLVIKKIEHPPSYSVYIDCKNSLGAKFIHATLDVTINDILSPIDVPHIVHSFFDHHKALSHDGCTMSLLSIQVTELLDGVFIGCSMNHCTGDGTAYWNFFNTFSKIFQNDNHVFGPISHQPINTRWFPEGYGPIINLPFKHEAEFIYRYDETANFRERIFHFSAESIAKLKAKANKESNTNEISSFQSLSALVWRSITRARHLEHDKRTTIKLAVNNRTRMKPSLPNEYFGNSISATSTETTVGELLENDLGWAAWKIHMAIINHDDKVVRNWVEEWLHSPFVYKTDLFFDPYTVMMGSSPRFNMYGNEFGMGKALGVRSGYANKFDGKITSYPGQEGGGSIDLEVCLSPDKMMALETDEEFMSSTSVFNPLF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0015 459 Pfam Transferase family 7 449 - -
Tpr3g0015 459 Gene3D - 6 219 IPR023213 -
Tpr3g0015 459 Gene3D - 227 444 IPR023213 -
Tpr3g0015 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 451 - -
Tpr3g0015 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0015 Tpr-Chr3 153881 155515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0015 48 443 Monolignol Biosynthesis Gene Families AT5G48930 26.379 1.09e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0015 - - gmx:100787228 648.662