Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0014 ATGAGCAATCCTTTTCCTACACTTGTTTCTGAATCTTTCATCAAACCATATCCTCCAATTGAAGACTCAAAACAAATATGCTATTTAGCACCTTGGGATATTGCTATGTTATCTTCACACTATATCCAAAAGGGTCTTCTGTTCAAAAAACCATCATCATCATCATCATCATTGAACCAACAATATTTCATTGAGAATCTAGTACACAAACTCAAACATTCTCTTTCTCTCACACTTTACCATTTCTATCCTCTCTCAGGTCGTCTTGTTATCAAAAAAACCAAACACCCTCCTTCTTACTCTGTTTATGTAGATTGGAAAAATAGTCTTGGAGCTAAATTTATTCATGCAACTTTAGATATCACAATCAATGATATTCTCTCACCTACTGATGTCCCACACATTGTTCATTCCTTTTTTGATCACCACAAAGCACTCAGCCATGATGGTTGCACCATGTCTTTGTTATCTATTCAACTCACTGAACTATTAGATGGTGTTTTCATTGGTTGTTCCATGAACCATTGCATTGGTGATGGAACTGCTTATTGGAATTTCTTTAACACATTTTCTGAGATATTTCAAAATGATAATCATGTTTCGCATCAACCTATCAACACTAGATGGTTTCCAGAAGGTTATGGTCCAATTATCAACCTCCCTTTTAAACACGAGGCCGAGTTTATTTATAGATATGATGAAACAGCTAATTTTAGAGAGAGAATATTTCATTTTTCAGCAGAGTCTATAGCGAAACTTAAAGCAAAAGCTAACAAAGAATCTAATACAAACAAAATCTCTTCGTTTCAATCTTTATCAGCATTGGTTTGGAGATCTATAACTCGTGCACGTCACCTAGAACATGATAAGAGAACGACTATTAAGTTGGCTGTAAACAATCGAACAAGAATGAAACCGTCTCTTCCTAACGAATATTTTGGGAATTCAATTTCTGCAACGAGTACTGAAACGACAGTAGGGGAGTTGTTGGAGAATGATCTAGGATGGGCAGCATGGAAGATTCACATGGCCATTATAAATCATGATGATAAAGTGGTGAGAAATTGGGTTGAAGAGTGGTTACATTCACCTTTTGTGTATAAAACAGATCTGTTCTTTGATCCTTATACTGTGATGATGGGTAGTTCACCTAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAAGCTTTGGGTGTTAGAAGCGGGTATGCAAACAAATTTGATGGAAAAATAACATCATATCCAGGTCAAGAAGGAGGAGGGAGCATTGATCTTGAAGTGTGTCTTTCACCAAATAAAATGATGGCGCTAGAAACCGATGAAGAGTTCATGAGTTCAACTTCGGTGTTTAATCCATTGTTCTAG 1371 0.3611 MSNPFPTLVSESFIKPYPPIEDSKQICYLAPWDIAMLSSHYIQKGLLFKKPSSSSSSLNQQYFIENLVHKLKHSLSLTLYHFYPLSGRLVIKKTKHPPSYSVYVDWKNSLGAKFIHATLDITINDILSPTDVPHIVHSFFDHHKALSHDGCTMSLLSIQLTELLDGVFIGCSMNHCIGDGTAYWNFFNTFSEIFQNDNHVSHQPINTRWFPEGYGPIINLPFKHEAEFIYRYDETANFRERIFHFSAESIAKLKAKANKESNTNKISSFQSLSALVWRSITRARHLEHDKRTTIKLAVNNRTRMKPSLPNEYFGNSISATSTETTVGELLENDLGWAAWKIHMAIINHDDKVVRNWVEEWLHSPFVYKTDLFFDPYTVMMGSSPRFNMYGNEFGMGKALGVRSGYANKFDGKITSYPGQEGGGSIDLEVCLSPNKMMALETDEEFMSSTSVFNPLF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0014 456 Pfam Transferase family 9 446 - -
Tpr3g0014 456 Gene3D - 224 441 IPR023213 -
Tpr3g0014 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 448 - -
Tpr3g0014 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 448 - -
Tpr3g0014 456 Gene3D - 7 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0014 Tpr-Chr3 148462 149832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0014 48 440 Monolignol Biosynthesis Gene Families AT5G48930 25.467 9.83e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0014 - - gmx:100787228 623.624