Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0011 ATGATGAATTCCCCTGTAGCTCAACGCGTTTCGGAATGTTTTATCAAACCACAACACCCCATTCCAGAGTCAAACCAAATATGCTATTTGACGACATGGGATATTTCCATGTCGTCAATGAACTACATCCAGAAAGGACTTTTATTCAAAAAACCAACACAACCAAATAACCAACAAGATTTCGTCGAAAATCTATTGGAGAAGCTCAAACACTCACTCTCTATAGCTCTATTTCATTTCTATCCTCTGTCTGGTCGTGTCGTTACACAAAAATCTCAAGACCCTCCCTCTTATGTTATTTTTGTTGATTGCAGTAACAATAACAACGGCGCTAAATTCATCTACGCAACTTTGGATATGACTGTATCTGATATCCTTACCCCGATTGATGTTCCACTAGTTGTTAAGTCGTTGTTTGATCTCGATAAAGCAATCAATCATGACGGTCACACCATGCCTTTGTTATCTATACAAGTCACTGAGCTAGTGGATGGTGTTTTCGTAGGTTGTTCCATGAATCACTATATTGGTGATGGAACTTCTTATTGGAAATTTTTTAATATATGGTCTGAAATATTTCAAGCTCAAGGCCAAGGGCGCGATGTTGCCATTTTGCGTGAACCCTTTCACAATCGTTGGTTTCCAGAAGGTTATGGTCCACTAATCAATCTTCCATTCAAACATCATGACGAGTTTATAAGTAGATATGAAGCACCCGAGCTGATAGACAGATTCTTCCACTTTACAGCTGAGTCTATCGCGAAATTGAAAGCAAAAGCCAATATGGAGTCTAATACAAGCAAAATCTCTTCTTTCCAGTCCTTAACTGCACATGTTTGGAGATGTATAACTCGTGCTCGCGGGATATCAAATGATCAAATAACAACTTGTTTGTTAGCAGTAAACAATCGACCGAGAATTAAGCCATCTCTTCCGGAAGAGTACTTTGGGACCTCAATTGATACGGTAGGTACACAATCGACTGTAGGAGAATTGCTTGAGAATGATTTGGGATGGGCAGCATTGAAGGTGCATGTTGCTATTGCAAACCATGACGACCTAGAGGTACGAAAGAAAGTCAAAACGTGGTTAGAGTCTCCGACTATATTCAGCCTTAACCACCACTTGCCTCCGTTTAGTGTGGCTATGATAAGTTCACCGAGGTTTAATATGTATGGGAACGAATTTGGAATGGGGATACCGGTGGCAGTTCTGAGTGGTCATGCAAATAAATGTGATGGTAATGTGACATCATACGAGGGGCGCGAAGGAGGGGGGAGCATAGATTTTGAAATTTCTCTTTCTGCGAATGCTATGAGAGCGCTCGAATTGGACGAGAATTTCATGAATGCAGCTTCAGTGACCAATCCCTCTAATTAA 1380 0.4072 MMNSPVAQRVSECFIKPQHPIPESNQICYLTTWDISMSSMNYIQKGLLFKKPTQPNNQQDFVENLLEKLKHSLSIALFHFYPLSGRVVTQKSQDPPSYVIFVDCSNNNNGAKFIYATLDMTVSDILTPIDVPLVVKSLFDLDKAINHDGHTMPLLSIQVTELVDGVFVGCSMNHYIGDGTSYWKFFNIWSEIFQAQGQGRDVAILREPFHNRWFPEGYGPLINLPFKHHDEFISRYEAPELIDRFFHFTAESIAKLKAKANMESNTSKISSFQSLTAHVWRCITRARGISNDQITTCLLAVNNRPRIKPSLPEEYFGTSIDTVGTQSTVGELLENDLGWAALKVHVAIANHDDLEVRKKVKTWLESPTIFSLNHHLPPFSVAMISSPRFNMYGNEFGMGIPVAVLSGHANKCDGNVTSYEGREGGGSIDFEISLSANAMRALELDENFMNAASVTNPSN* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0011 459 Gene3D - 9 221 IPR023213 -
Tpr3g0011 459 Pfam Transferase family 13 447 - -
Tpr3g0011 459 Gene3D - 230 444 IPR023213 -
Tpr3g0011 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 452 - -
Tpr3g0011 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0011 Tpr-Chr3 129710 131499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0011 49 443 Monolignol Biosynthesis Gene Families AT5G48930 28.744 7.65e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0011 - - lja:Lj1g3v1664450.1 666.766