Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0008 ATGAATTTCAAGGGTTTTGGGAATGATCCGGGGGCGTCGGCCGCAGCAGCTGGTGGCGGAGTTGGGAGGACAACGCCGGGGAATTTTCCACTTGTGAGGCAACCGTCGGTTTATTCGTTGACGGTTGATGAATTTATGAACAGTATGGGTGGTTCTGGGAAGGATTTTGGATCAATGAATATGGATGAATTGTTGAAGAATATTTGGACTGCAGAAGAGGTTCAAACAATGGGTGGTGAAGAAGCTATTAATCAGTTGCAAAGACAAGGTTCGTTGACGCTGCCGCGGACGCTTAGTCAGAAAACAGTTGATGAAGTTTGGAAGGATATTTCAAAGGATTATGGTCCTAATTTGGCTGCACTACAGGCTCAGAGACAGCCAACTTTAGGAGAAATGACTTTGGAAGAGTTTTTGGTTAGAGCTGGTGTTGTTAGGGAAGATGCTAAACCTAATGATGGAGTTTTTCTTGGAAATAATGGTAATTTGGGTTTGGCTTTTCAGCCTCAGCAGATGAATAAAGTTGGTGGTTTTATGGGGAATAATAGATTGAATGGTAATGATGATCCACTTGTTGTTGGTCTTCAGAGTCCTACTAATTTGCCGTTGAATGTTAATGGGATTCGATCAACAAATCAGCAACAGATACAGAATTCACAGTCTCAACAACAACACCAGAATCAACAACTTCAGCAACTTCAACAACAGCATCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGATATTTCCGAAGCAACCTGGTTTGAACTATGCAACGCAGATGCCTCTGACTAGTAATCAAGGAATGAGAGGTGGAATTGTGGGGCTGTCTCCTGATCAAGGAATGAATGGTAATCTTGTGCAAGGTGGAGGGATTGGTATGGTTGGTTTGGCACCTGGAGCTGTTCAAATTGGTGCCGGATCACCAGCTAACCAGTTATCTAGTGATCAAATGGGAAAGAGTAACGGTGATACTTCTTCTGTGTCACCGGTTCCTTATGTTTTCAATGGTGGTATGCGAGGTAGGAAGAGTAATGGAGCTGTGGAGAAGGTAATTGAGAGGAGGCAGAGAAGAATGATCAAGAATAGGGAGTCTGCTGCTAGATCTCGGGCTCGTAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAAGAGAATGAAGAACTTCAGAAAAAGCAGGAGGAAATCATGGAAATTCAGAAAAATCAAGTTAAGGAAATGATGAATTTGCAGCGAGAAGTCAAGAGAAAATGCTTAAGACGAACACAAACTGGTCCGTGGTAG 1302 0.4339 MNFKGFGNDPGASAAAAGGGVGRTTPGNFPLVRQPSVYSLTVDEFMNSMGGSGKDFGSMNMDELLKNIWTAEEVQTMGGEEAINQLQRQGSLTLPRTLSQKTVDEVWKDISKDYGPNLAALQAQRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFLGNNGNLGLAFQPQQMNKVGGFMGNNRLNGNDDPLVVGLQSPTNLPLNVNGIRSTNQQQIQNSQSQQQHQNQQLQQLQQQHQQQQQQQQQQQQIFPKQPGLNYATQMPLTSNQGMRGGIVGLSPDQGMNGNLVQGGGIGMVGLAPGAVQIGAGSPANQLSSDQMGKSNGDTSSVSPVPYVFNGGMRGRKSNGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMEIQKNQVKEMMNLQREVKRKCLRRTQTGPW* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0008 433 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 433 IPR043452 GO:0003700|GO:0045893
Tpr3g0008 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 353 404 IPR004827 GO:0003700|GO:0006355
Tpr3g0008 433 Coils Coil 371 423 - -
Tpr3g0008 433 CDD bZIP_plant_BZIP46 355 409 - -
Tpr3g0008 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 358 373 IPR004827 GO:0003700|GO:0006355
Tpr3g0008 433 Gene3D - 353 422 - -
Tpr3g0008 433 MobiDBLite consensus disorder prediction 211 234 - -
Tpr3g0008 433 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 433 - -
Tpr3g0008 433 SMART brlzneu 351 416 IPR004827 GO:0003700|GO:0006355
Tpr3g0008 433 Coils Coil 215 249 - -
Tpr3g0008 433 Pfam bZIP transcription factor 355 406 IPR004827 GO:0003700|GO:0006355
Tpr3g0008 433 SUPERFAMILY Leucine zipper domain 355 404 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0008 Tpr-Chr3 58059 62897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0008 29 433 bZIP Transcription Factor Family AT3G19290 47.285 1.03e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g0008 bZIP_1 3.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0008 K14432 - gmx:100819313 496.893