Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0002 ATGGTTGCACTTACAGCAATAGCAAGAAGCTTCCATATCCAGCAACACTCTTTAGTCAACAGCAATACCATTGGTAAATCTTCAACAGCACCACACTACTGGCTAAGGCCTGCAACTACAGGAACAGGAGTCACTCGACGTTATAGGCAAATTTGTGCAGCAGCTCAACAGCGACCAACATGGCTCCCAGGACTTGATCCCCCAACTTATCTTGATGGAACTCTGCCTGGAGATTTTGGGTTCGACCCACTTGGGCTTGGAGAGGATCCTGAAAGCTTAAAGTGGTATGTGCAAGCAGAGTTGGTTCATGCTCGCTTTGCAATGCTTGGGATCTTTGGAATTCTAGTCACAGATCTACTTCGTGTTGCAGGAGTTAGTAGCATACCAGTTTGGTATGAAGCTGGTGCAGTAAAATACGAGTTCGCGAACACAGGGACGCTCGTCGTTATTCAGCTACTCTTGATGGGGTATGCCGAAACAAAAAGGTACATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGAGGGTTCCTTCTTTGGATTGGAAGCTTCACTTGGTGGCCTAGAGCCAGGGTATCCTGGAGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGACATTAAAAATGCTCATGACTGGAAGCTTAAAGAGATCAAGAATGGGCGACTTGCAATGGTGGCAATACTTGGCATCTTTGTACAAGCTTCAGTGACTCACGTTGGACCAATTGATAACCTTGTTGAGCATCTCTCAAATCCATGGCATAAAACTATTATTCAGACCCTTGCAAGTTCCAGTTCTTAG 804 0.4552 MVALTAIARSFHIQQHSLVNSNTIGKSSTAPHYWLRPATTGTGVTRRYRQICAAAQQRPTWLPGLDPPTYLDGTLPGDFGFDPLGLGEDPESLKWYVQAELVHARFAMLGIFGILVTDLLRVAGVSSIPVWYEAGAVKYEFANTGTLVVIQLLLMGYAETKRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0002 267 Gene3D Chlorophyll a/b binding protein domain 60 267 - -
Tpr3g0002 267 SUPERFAMILY Chlorophyll a-b binding protein 54 264 - -
Tpr3g0002 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 14 264 IPR001344 GO:0009765|GO:0016020
Tpr3g0002 267 Pfam Chlorophyll A-B binding protein 67 235 IPR022796 -
Tpr3g0002 267 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 14 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0002 Tpr-Chr3 6949 8669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0002 50 262 Chloroplast and Mitochondria Gene Families AT3G61470 47.664 2.03e-63 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0002 K08911 - gmx:100804934 400.979