Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6141 ATGTCTTTAGTTATGTTTCTACCATGCATTATTCTTGCACATATTTCATTTCTCAATGTCTTACAAGCCATAGACTTAAATTCAAGCATCACTGCTGGATCAAATTCAACTTGGAAATCACCTTCTGGCGATTTCCAATTCGGATTCTACCCTCTTCCTAATGGTCTTTTTCTACCAGGAATATGGTTTGCAAAAATCCCACAAAAAACATTGGTATGGTACAAAAGTCCCTCAGTTGAACCAAATTCCTTACTCCAACTCACTTCTGAAGGACATCTTGTGATAACACATCCCAATGGAACCATTTCTCAAACCATAGTTAACATTGGAGGAGATAGTGATGCTGCAAATTCTGCTCAGATGCAAGATGATGGAAATTTCGTGTTGAAAGACTCTAATCTAAGAACTTTGTGGGAGAGTTTCGATTCTCCGGCTAACACGATGGTACCTGGACAAACCTTGAAAAGCAATCAAATCCTCTATTCTAAAGGGAAAGGAGCTTCAAACTATTCAATGGGAAGTTTCATGCTTGAAATGCAGGGTGATGGTAACTTGATCCTCAAGGCACATCAATTTTCAGATCCTTCATATTGGTACACTTCAACTTTAGTCTCAAATTTGAATTTAGTTTTTAATGAATCTAGTTCCTTGTTGTATCTTGCAAATGGAAATGGAAACATTATTTATTCTTTAACCAAAAGTACTCCAACTCCGGTAAAAGATTTCTATCATCGCGCTACAATTGATGAAAATGGAAATTTCCAACAATATGTTTATCACAAAAGAAATGGAACTAAATGGGAAAGGGTTTGGAGAGCTATAGATGATCCATGTAGAGTGGATTTTGTTTGTGGAATTTATGGTTTATGTACTTCTCCGGATAATGAGTCGGTCAACTGTGATTGTATTCGAGGTTATATTCCATTTGATCAAGAAGATGTGTCTAAAGGGTGTCATCGAGAAACTGTAATCAATTATTGTAGTGGACCTAATATGATGAATTTTAAGCTAGAAGTGTTCGATGATACTGATTTTCAATTTTATCCTGATTTTGCTCTAATCAATGATGTTGATTTGGAAGGTTGTAAGAAATCTGTAATGGATGATTGTAATATCATTGCAGCTACTTATAATTCTTCAACTTCAACATGTGCTAAGAAGAGAATGCCATTGCTGAATGCAAGAAACAGTTCATCTTCTAAAGGACAAAAAGCACTTCTAAAAGTAGCTTATAGTAATAATGAGTTCAATACATTTGGAGTTTCAAAGAAAAAGAGTTTTAATGTGAGAGTTTTTTTGAAGGTTATGGTTGCAATTAGTGCTACTCTTGCATGCTTCTTTGGAGCTCTTGCTGCATATTATCATCCTTATGTAAAAAGACTAACAAGAAGGAAAAAGTTTCTGAATGCAACAGATATTGGAATCAACTTCAGAGAATTCACATTCGACGAATTGCATGAAGCAACAGATGGATTTAATGTTAGTAGGATTCTTGGCAAGGGATCTTCAGGGAAAGTCTACCGTGGTACATTGATTATCGATGACGCGGAAATTGGTATTGCAGTGAAGAAGCTAGAAAAGAAGATTGAGAAAAGTGAGAATGAGTTCATGACTGAGCTTAAAATTATAGGACTTACACATCACAAAAATTTGGTAAAACTTTTGGGATTTTGCATGGAGAATAATCATAGAATACTTGTCTATGAGTTAATGCCAAATGGAGCATTGTCAAGTTTATTGTTTGGACAAAAAGGAGAAAAACCTCAATGGATTCAAAGAGTTGAAATGGCTCTTGGAATAGCAAAAGGCTTACTCTACTTGCATGAAGAGTGTGAAACACAGATCATACATTGTGATATCAAGCCACAAAATGTGTTACTTGATGCTAATCATGTTGCAAAGATTGCTGATTTTGGACTTTCAAAGCTTTTGTACAAAGATCAAACAAGAACAAATACTAATTTTAGAGGAACAATAGGGTACATAGCACCTGAATGGTTAAGGAATTCACCTATAACTGCAAAAGTTGATGTTTTCAGCTTTGGTGTTATGTTACTTGAGATTATTTGTTGTAGGAGACATGTTGAGTCATATCAAAGTCATGATGAGGATGAAAGAGGAAGTGAAGATGATGATTTGGTTCTTGTTAATTTGGTTCTAAGGTGCATGGTTTCTAAGAAATTGGAGATAGTGGTAAGTGATGACTTGGAAGTACTTAATGATTTTAAGAGGTTTGAGCAAATGGCTTTGGTTGGATTATGGTGTCTTCATCCAAACCCAACTCTTAGACCTTCAATGAAGAAAGTCACTCAAATGCTAGAGGGAACTGTGGAAGTTGGTGTTCCACCTTTGCTTAATGATGAAATTATGGCAAATTAG 2379 0.3535 MSLVMFLPCIILAHISFLNVLQAIDLNSSITAGSNSTWKSPSGDFQFGFYPLPNGLFLPGIWFAKIPQKTLVWYKSPSVEPNSLLQLTSEGHLVITHPNGTISQTIVNIGGDSDAANSAQMQDDGNFVLKDSNLRTLWESFDSPANTMVPGQTLKSNQILYSKGKGASNYSMGSFMLEMQGDGNLILKAHQFSDPSYWYTSTLVSNLNLVFNESSSLLYLANGNGNIIYSLTKSTPTPVKDFYHRATIDENGNFQQYVYHKRNGTKWERVWRAIDDPCRVDFVCGIYGLCTSPDNESVNCDCIRGYIPFDQEDVSKGCHRETVINYCSGPNMMNFKLEVFDDTDFQFYPDFALINDVDLEGCKKSVMDDCNIIAATYNSSTSTCAKKRMPLLNARNSSSSKGQKALLKVAYSNNEFNTFGVSKKKSFNVRVFLKVMVAISATLACFFGALAAYYHPYVKRLTRRKKFLNATDIGINFREFTFDELHEATDGFNVSRILGKGSSGKVYRGTLIIDDAEIGIAVKKLEKKIEKSENEFMTELKIIGLTHHKNLVKLLGFCMENNHRILVYELMPNGALSSLLFGQKGEKPQWIQRVEMALGIAKGLLYLHEECETQIIHCDIKPQNVLLDANHVAKIADFGLSKLLYKDQTRTNTNFRGTIGYIAPEWLRNSPITAKVDVFSFGVMLLEIICCRRHVESYQSHDEDERGSEDDDLVLVNLVLRCMVSKKLEIVVSDDLEVLNDFKRFEQMALVGLWCLHPNPTLRPSMKKVTQMLEGTVEVGVPPLLNDEIMAN* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6141 792 Gene3D Transferase(Phosphotransferase) domain 1 571 779 - -
Tpr2g6141 792 ProSiteProfiles Protein kinase domain profile. 492 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6141 792 Pfam S-locus glycoprotein domain 240 308 IPR000858 GO:0048544
Tpr2g6141 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 785 - -
Tpr2g6141 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Tpr2g6141 792 CDD STKc_IRAK 498 775 - -
Tpr2g6141 792 ProSitePatterns Protein kinases ATP-binding region signature. 498 524 IPR017441 GO:0005524
Tpr2g6141 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 202 IPR036426 -
Tpr2g6141 792 Pfam Protein kinase domain 493 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6141 792 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 785 - -
Tpr2g6141 792 Gene3D - 144 276 - -
Tpr2g6141 792 Coils Coil 522 542 - -
Tpr2g6141 792 SMART blect_4 29 144 IPR001480 -
Tpr2g6141 792 Gene3D Phosphorylase Kinase; domain 1 465 570 - -
Tpr2g6141 792 Gene3D - 21 143 IPR036426 -
Tpr2g6141 792 SMART serkin_6 492 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6141 792 PIRSF SRK 1 790 IPR024171 GO:0004674
Tpr2g6141 792 Pfam D-mannose binding lectin 77 158 IPR001480 -
Tpr2g6141 792 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Tpr2g6141 792 SUPERFAMILY Protein kinase-like (PK-like) 470 774 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6141 Tpr-Chr2 74317997 74320678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6141 435 783 Receptor kinase-like Gene Family AT3G53380 39.601 2.53e-69 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr2g6141 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6141 - - lang:109330973 1184.47