Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6120 ATGGCTGCTTCTTCCAAAACCATCATCAACAAAGAGATAGAAAAAGAGCTTCTACCTCTTATCCGTGTCTACAAAGATGGCACCATAGAACGTCTCATGAGCTCTCCAATGGTTCCACCTTCCATTGAAGACCCTCAAACTGGTGTCTCATCCAAAGACATTGTTATCTCAAACACTAGCAACCCTCCCCTCTCCGCTCGCATTTTCCTTCCAAAATCACACCAAAACAACCACAAACTTCCCATCTTGCTCTACTTTCACGCCGGTGCTTTTTGCGTCGAATCACCCTTCTCTTTTTTCTGCCACCGTTACCTCAATCTCTTGGCTTCTGAAGCAAATATAATAGCTGTTTCTATAGATTTCAGACTTCTTCCAGAACATCCTCTTCCTGCAGCTTATGAAGATGGTTGGACTGCTCTTCAATGGGTTGCTTCTCACACAAGCAACGACACCACCACCAACAATAACATAGAAACAGAGTCATGGTTACTAGATTATGGTGATTTCAACAGAGTTTACATAGGTGGTGATGTCAATGGTGCTAACATTACTCATAACTTAGCTATACGTGCCGGAACCGAAGCTTTACCAAACAATCTTAAAATATTGGGTGCTTTGCTATGTACTCCTTTTTTCTGGGGCTCAAAGCCAATTGGGTCTGAGCCTGTGGAGGAGCATGAGAATAGCTTGGCTATGAAAGTGTGGAAATTTGTGTACCCTAATGCAGAGGGTGGAATTGATAACCCTATGGTTAACCCTTGTGCTCCTGGTGCACCTAGTTTGGCTACACTAGGTTGTTCTAAGATTCTGGTTATTATTACTGACAAGGATGAGTTTAAAGACAGAGATATTTTGTACTATGAATCTGTCAAAAAAAGTGGATGGCAAGGTGAAATTGAATTGTTTGATGCTGGGGATGAGGCACATGGTTTCCAGATTTTCAAACCTGAAACTGATAGGGCTAAACAATTGATCAAACGTTTGGCTTCTTTTCTTGTTTGA 1002 0.4182 MAASSKTIINKEIEKELLPLIRVYKDGTIERLMSSPMVPPSIEDPQTGVSSKDIVISNTSNPPLSARIFLPKSHQNNHKLPILLYFHAGAFCVESPFSFFCHRYLNLLASEANIIAVSIDFRLLPEHPLPAAYEDGWTALQWVASHTSNDTTTNNNIETESWLLDYGDFNRVYIGGDVNGANITHNLAIRAGTEALPNNLKILGALLCTPFFWGSKPIGSEPVEEHENSLAMKVWKFVYPNAEGGIDNPMVNPCAPGAPSLATLGCSKILVIITDKDEFKDRDILYYESVKKSGWQGEIELFDAGDEAHGFQIFKPETDRAKQLIKRLASFLV* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6120 333 Pfam alpha/beta hydrolase fold 83 312 IPR013094 GO:0016787
Tpr2g6120 333 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 11 332 - -
Tpr2g6120 333 Gene3D alpha/beta hydrolase 3 333 IPR029058 -
Tpr2g6120 333 SUPERFAMILY alpha/beta-Hydrolases 11 332 IPR029058 -
Tpr2g6120 333 PANTHER ARYLACETAMIDE DEACETYLASE 11 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6120 Tpr-Chr2 74183158 74184494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6120 9 332 Carbohydrate Esterase AT3G48690 39.157 3.11e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6120 - K13258 gmx:547489 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g6120 2 74183158 74184494 Tpr1g0571 1 4745392 4746671 PCT
Tpr1g0575 1 4777305 4779012 Tpr2g6120 2 74183158 74184494 PCT