Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6118 ATGGAACATACGATGCTACAAACCATTGTGACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCTTCGTTTTCCTCTTCTTTCTCTTCAAACCATGGCGCTTCTTTTTCTCTTCTCGCTTTCGCTCTTCTTCCATCAACAACAACAACAACAACAAGGGTTCTATTGGTGGTGGTGAATTAGAAAGACCACTTGTTGAAGATGATGTTAATGCTTCTTCTTATAATAATCAGCATAATCATAATGAATTACCTAGAGATTATGATCTTGAAGGTGCGTGTTATCCTAATGAAGTTAATTTTCGTTCTCCAAGAACACATGGACAAGGACTTGTTCATAAACAAAGGCTTCATAATCATTCTGTTTCACCTAATTTTCCACAAGGTGATACTTTGATTGTTGATGTAATCTCTGATCATCATCATTCTGAAGATGTTGCTGATGTTACTCAAGTATTTAAGCTACCTCCTCCACCTCTTTTAGCTCAAATTCATCAAAAACCTAATAGTACTACTACTAATAATAATAATCAGAATGATAGAGTGCAAGATTTTGTGCAAAGAGATATCACTGATCAAAGAAGTTGCCTTACTTTGGAGGTTATCACCGGTCCGTCTTGTGGATTACGATGTTCCGTGCAGTCGACGAATCCCTCTCGTCTACCGCTGACGTTGGGAAGGGTTTCTCCTAGTGATTTGTTGATAAAGGACTCGGAGGTGTCGGGAAAGCATGCTTTGATCAAGTGGAATTTGGATAATATGAAATGGGAGTTGGTAGATATGGGTAGCTTGAATGGAACACTTTTGAATTCTAAGTCAATCAACCATCCTGACACTGGAAGTAGGCATTGGGGAGATCCAATGAATCTTGCTAATGGAGATGTTATAACTCTTGGGACAACATCAAAAATAATTGTTCATATCACTTCACAAAATCCTCGTCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGGAAAAAAACTTCCTATGGAGGATGTTTGCTATTATCAATGGCCTCTACCTGGATTGGATCAGTTTGGTCTTTTTGGCATTTGTGATGGGCACGGTGGTGATGGGGCTGCCAAATCTGCTAGCAAACTCTTTCCTGAGATAATTGCTAGTATATTATCAGATTCATCAAAAAGGGAGAGGGTTTTATCACTTCGTGATGCTTCAGGTATCCTTCGAGATGCATTTTCTCAAACTGAAGCACGTATGAATAATTATTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGACTGTAATGATAATTTCTATGCACAATGTGCAAATGTTGGAGACTCTGCATGCATTATGAGTGTTAATGGCCAACAAGTCAAGATGACAGAAGATCACAAGATAGCGAATTATTCCGAAAGACTAAGAATTGAAGGGACCGGTGAACCATTAAAAGAAGGGGAAACCCGACTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTAAAACAGCAGGATTCCCGATTCAGTTCTGAACCTTATATAAGTGAGCCCGTGCATATTCACCAAGCAAGCAAGGCTTTTGTTGTTCTAGCTAGTGATGGGCTATGGGACGTTGTCAGCGTGAAGAAGGCGATTCAGCTAGTGCTCCAGACAAGGGAGCGATACAATACAGATAGAGAGAATACAGCAGAAAAGATTGCTAGTATGTTGTTGAGTGAGGCTAGAACACTCAAAACAAAGGATAATACCTCCATAATATTCTTAGATTTTGATACCTTCAATAGTTTCTCTTGTAAAGTTGAATAG 1806 0.3976 MEHTMLQTIVTVLLLLMLLLIFVFLFFLFKPWRFFFSSRFRSSSINNNNNNKGSIGGGELERPLVEDDVNASSYNNQHNHNELPRDYDLEGACYPNEVNFRSPRTHGQGLVHKQRLHNHSVSPNFPQGDTLIVDVISDHHHSEDVADVTQVFKLPPPPLLAQIHQKPNSTTTNNNNQNDRVQDFVQRDITDQRSCLTLEVITGPSCGLRCSVQSTNPSRLPLTLGRVSPSDLLIKDSEVSGKHALIKWNLDNMKWELVDMGSLNGTLLNSKSINHPDTGSRHWGDPMNLANGDVITLGTTSKIIVHITSQNPRHIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIASILSDSSKRERVLSLRDASGILRDAFSQTEARMNNYYEGCTATVLLVWADCNDNFYAQCANVGDSACIMSVNGQQVKMTEDHKIANYSERLRIEGTGEPLKEGETRLYGINLARMLGDKFLKQQDSRFSSEPYISEPVHIHQASKAFVVLASDGLWDVVSVKKAIQLVLQTRERYNTDRENTAEKIASMLLSEARTLKTKDNTSIIFLDFDTFNSFSCKVE* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6118 601 Gene3D - 323 595 IPR036457 -
Tpr2g6118 601 SUPERFAMILY PP2C-like 331 591 IPR036457 -
Tpr2g6118 601 ProSitePatterns PPM-type phosphatase domain signature. 355 363 IPR000222 GO:0043169
Tpr2g6118 601 CDD FHA 196 301 IPR000253 GO:0005515
Tpr2g6118 601 Pfam FHA domain 223 298 IPR000253 GO:0005515
Tpr2g6118 601 SMART PP2C_4 312 588 IPR001932 -
Tpr2g6118 601 ProSiteProfiles Forkhead-associated (FHA) domain profile. 222 273 IPR000253 GO:0005515
Tpr2g6118 601 CDD PP2Cc 330 590 IPR001932 -
Tpr2g6118 601 PANTHER PROTEIN PHOSPHATASE 2C 45 600 IPR015655 GO:0004722|GO:0006470
Tpr2g6118 601 Gene3D - 190 322 - -
Tpr2g6118 601 SUPERFAMILY SMAD/FHA domain 194 305 IPR008984 GO:0005515
Tpr2g6118 601 PANTHER PROTEIN PHOSPHATASE 2C 70 45 600 - -
Tpr2g6118 601 Pfam Protein phosphatase 2C 329 583 IPR001932 -
Tpr2g6118 601 SMART FHA_2 221 273 IPR000253 GO:0005515
Tpr2g6118 601 ProSiteProfiles PPM-type phosphatase domain profile. 318 590 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6118 Tpr-Chr2 74166264 74171891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6118 27 592 PP2C-type Phosphatase Gene Family AT5G19280 56.261 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6118 K01090 - gmx:100170643 844.728