Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6114 ATGTCTGAACTGCATGTTGATCCACTTCCATCGAGTGGTGTTGCTACTCCTGTCGTAAAAGCGGCAGAGGTTAATGTCGACGCATCTGGTAAGAATTCTCTTAATCAAAACCTTAATATTCCAAATCCTGGTGAAACCCTAGGTGTAGAGACCCCTGAGATGTCTGGAAATTTGGGGAAAACTACTGATAAAGAAACTGTTCCTGATAACGCTGTGAATGATAATCCAGAGGTTATACTTGTTAATGAAACTACTACCAGTGATAAGGCTGTCCCTACAAACTCTGAGATTATTACTTCAAAAGAAAGATTAACAAACAAACAAACCAACCATCCAACAAACATGCTTTCTTCTTCTTCTTCATCTTCTTCTTCTTCTTCTTCTTCTCCGCAACACAATCACATTATGAATAATATGTTTGAGGAAGAGTTGCTAAAGGCAAATGATGAACGTTACCAAATGGAATTTGGAGGTCCATCAAAACAGAGTGATGAACAACAACAACCAAACCAAGATGAACAACAACCCAACCAATGTCTAAAAAAAAGGAACTATCGCCGCCATACACAAGAACAAATAGAAGAACTTGATACTTTCTTCAAGAAGAATGCTTACCCAGATGACAAGGAAAGAAAAGAGCTGAGTCGTCGGCTTGGATTAGATCTTTCACAAATTAAGTTCTGGTTTCAGAACAGGCGCAATGGTTTGAAGGTTCGAAGTGAAAGAGAAGAGAATGAATTATTGAAGGCTGAGATCGAAAAGCTTCGAGCTGAGATGAATAGATACAAGACAACCCCATCTACATGTAACGTGTGCGGAATTCCGGCTACTCATATGATGTCCAATGAGCAACAACAATTGAAGTTGGAGAATGCTCTCTTAAGAAAAGAGCTTGAAAAATTTGGAGCTCAGAACCCGATAAATCCTGTCGATTCCTATAACAACATATCTTCACCACCGAATAGCAATCAAGGGCCTCAACATTCTGTTGGTAACTACAATGGAGCAATGAATGGTATGGTAGGAGAAGCATATGTTGGTGGTAGTGGCATTGGCAGTGATCTTGTTAAGTACTATGTTCCACCTCAAGGTCTTGATGATAGTAAGATTGTTGAGTTAGCTGTTGTAGGAATGGATGAACTAATAAGATTGGATCAAACTAGTGGGCCTCCTTTGTGGTTACCTACCAACTCTCTTAATGGAGAAGAATATATGTTGCAGTTTCCTACAAGCATTGGTCCCAACCCAATGAAGTTAAGACATGATGGTTCTAAAGAGTCTGCCGTGGTCTTCATAAATCCTATTAGTTTGGTTGATATCTTTATGGATGTGAGTCAATGGTCAAATATGTTTTGCGGAATTGTTTCAAGAGCTGCAACACTCAATGTCCTTTCAACTGGAGTGGCAGGAAATTATGACGGAGCCTTACAAGTGATGTCAGCTGAATTTCAGGTTGCCTCACCATCTATTCCTACTCTTGAAAACTATTTCGTGAGATACTGTAAATTGCTTCCAAACAGTATATGGGTAGTGGCTGATATTCCCTTGGATAATTTTTCTCCTACATCTATCTCAAGAACCAAAAGAAGAGTTTCTGGTTGTTTGATTCAAGAACTACCACATGATTATTCTAATGTTACATGGATTGAACACTTAGAAGTTGAGGATAACGAGGTACAAACTATATATACTCCTCTAATTAATTCTGGACTTGCATTTGGAGCTAAACGGTGGATAGCCATATTACAAAGACGATGCGAACGTCTTGTTTATTCAATGTCCAACAACATACCTATTACAGGGAGCATTGGTGTGAGGATGACTAATGCGGGAAAGGAAAGTATGTTGAGGTTAGCAGGAAGAATGGTAACCAGCTTTTGTACTAGTATTGGTGCTTCTACAGCACATGCTTGGACAAATCTACCATCAAATGGGTCTGAGGAAGTAAAGGTTATGACCAAAAAATATATCGGCGAATCAGGCAGTGATATATCATCTGATGTAGTGTTAAGTACTGCTACTTCTTTCTGGCTTCCCATTCCTCCCAAAAGGGTTTTTGAGTTTCTTCGTAATGAAAGTTCAAGAAGTCGATGGGATATTCTCTCCACCGGATGTACAGTTCAAGATGTGGCTCACATTGTCAATGGTTGTGATCCTGGCAATTGTGTGTCTTTACTTCGTGTCTGTAGTGAAAATACAGGTCAGAGTAATAGGGTGGTACTACAAGAGAGTTGCACTGACATAACTGGCTCATATGTAGTATATGCGCCAGTTGATGTCATTGCAATGAATTTAGTATTATGTGGTGGCGACTCAAATTGTGTTACTATGATTCCTTCCGGATTCGCTATTCTTCCCGATGGAGGACCAATTATGGATAATGGATCTGGAGGTTCTCTTATCACAGTTGGATTTCAAATTTTTGTTGATTCGGTTCCACATACAAGGCTAGCTCTAGGTTCAGTCTCCACTGTTAACACTTTGCTCAAGGCCACTGTGGAAAGGATTAAAGTTGCATTGATGCCTAAGTGA 2532 0.3961 MSELHVDPLPSSGVATPVVKAAEVNVDASGKNSLNQNLNIPNPGETLGVETPEMSGNLGKTTDKETVPDNAVNDNPEVILVNETTTSDKAVPTNSEIITSKERLTNKQTNHPTNMLSSSSSSSSSSSSSPQHNHIMNNMFEEELLKANDERYQMEFGGPSKQSDEQQQPNQDEQQPNQCLKKRNYRRHTQEQIEELDTFFKKNAYPDDKERKELSRRLGLDLSQIKFWFQNRRNGLKVRSEREENELLKAEIEKLRAEMNRYKTTPSTCNVCGIPATHMMSNEQQQLKLENALLRKELEKFGAQNPINPVDSYNNISSPPNSNQGPQHSVGNYNGAMNGMVGEAYVGGSGIGSDLVKYYVPPQGLDDSKIVELAVVGMDELIRLDQTSGPPLWLPTNSLNGEEYMLQFPTSIGPNPMKLRHDGSKESAVVFINPISLVDIFMDVSQWSNMFCGIVSRAATLNVLSTGVAGNYDGALQVMSAEFQVASPSIPTLENYFVRYCKLLPNSIWVVADIPLDNFSPTSISRTKRRVSGCLIQELPHDYSNVTWIEHLEVEDNEVQTIYTPLINSGLAFGAKRWIAILQRRCERLVYSMSNNIPITGSIGVRMTNAGKESMLRLAGRMVTSFCTSIGASTAHAWTNLPSNGSEEVKVMTKKYIGESGSDISSDVVLSTATSFWLPIPPKRVFEFLRNESSRSRWDILSTGCTVQDVAHIVNGCDPGNCVSLLRVCSENTGQSNRVVLQESCTDITGSYVVYAPVDVIAMNLVLCGGDSNCVTMIPSGFAILPDGGPIMDNGSGGSLITVGFQIFVDSVPHTRLALGSVSTVNTLLKATVERIKVALMPK* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6114 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-LIKE 166 841 - -
Tpr2g6114 843 SUPERFAMILY Bet v1-like 610 836 - -
Tpr2g6114 843 CDD START_ArGLABRA2_like 368 587 - -
Tpr2g6114 843 ProSiteProfiles START domain profile. 363 591 IPR002913 GO:0008289
Tpr2g6114 843 ProSiteProfiles 'Homeobox' domain profile. 179 239 IPR001356 GO:0003677
Tpr2g6114 843 Coils Coil 233 265 - -
Tpr2g6114 843 SUPERFAMILY Bet v1-like 368 589 - -
Tpr2g6114 843 Pfam Homeodomain 182 233 IPR001356 GO:0003677
Tpr2g6114 843 Gene3D - 164 253 - -
Tpr2g6114 843 SMART HOX_1 181 243 IPR001356 GO:0003677
Tpr2g6114 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 166 841 IPR042160 -
Tpr2g6114 843 MobiDBLite consensus disorder prediction 159 178 - -
Tpr2g6114 843 MobiDBLite consensus disorder prediction 77 132 - -
Tpr2g6114 843 SMART START_1 372 588 IPR002913 GO:0008289
Tpr2g6114 843 MobiDBLite consensus disorder prediction 33 132 - -
Tpr2g6114 843 CDD homeodomain 182 233 IPR001356 GO:0003677
Tpr2g6114 843 MobiDBLite consensus disorder prediction 55 69 - -
Tpr2g6114 843 SUPERFAMILY Homeodomain-like 169 237 IPR009057 -
Tpr2g6114 843 Coils Coil 284 304 - -
Tpr2g6114 843 MobiDBLite consensus disorder prediction 157 183 - -
Tpr2g6114 843 Pfam START domain 388 588 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6114 Tpr-Chr2 74116186 74131086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6114 164 840 Homeobox Transcription Factor Family AT4G04890 55.099 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr2g6114 START 3e-33 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6114 K09338 - gmx:100815499 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g6114 2 74116186 74131086 Tpr1g0560 1 4674901 4678958 PCT