Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6112 ATGTCAAATGTATGGATATGTGAATTGTTATCATTAGTAACATTGTTGGTTTCATATAATGTCTTTGTGTGTGAATGTCAAGATCCCGAAGCTCTGCCTAAAGAAGCTGAAGACTGTAACGGAGTTTTCATTTCGTATGATTTGCTTGATCGAAGGAAGGAATTCCCTCGCGTAAAGAATGTGACAGCACAATCTTGGGCCTTTAATGCAACTGCAAAAGTTCTCAACACAGGAAAAGATGTTGTTAAATCATGGAAATTGTTCATAGGATTTCAACATCATGAAATCCTTGTCTCTGCTTCTGGTGGTATTCCATTCGAAACCGGTGACTTTCCAGCTTCTGTTGAAAATGGGACAACCTTAGTTGGAAGTTCTCTTCCTGATTTGGAAAGTTCCATCAACACAGCCCATGATTTGTCCCAAATTCAAGCTTTGATTCAAATTGCTGGTACCCAATTTGGGGTTAGGCCACCTGGAATTCCCATGCCTAAAAGCATCAAGTTGGAAAATGATGGATATAAGTGCCCCCAACCAAGTGTAAGAAAGAGTTCCATGTTTGCATGTTGTAAAAGCGACCCAAATTACAAGTCAAAACTTTTGAAGACAAAATTGTTGCCACGTCAAAAAGGTGATCTAACCATAACCTATGATATTCTTCAAGCATATGACAACAACTATAATGTTGAAGTAACCATGGAAAATCATAACCCTTTATCAAGGTTAGATCGTTGGAACTTAACATTTGAATGGACAAGAGGTGAATTCATATACTCAATGAAAGGTGCTTTCACACGTGAAATGGATTCTTCAAAATGCATCTATGGTATTGCTGGACAATATTACAAAGACATGGATTTCACTAAAGTCACTAATTGTCAAAAAAATCCTATAATCAGTGATTTGCCTCCTGAAAAATATAATGATACTGAAATTGGTAAAATACCATTTTGTTGTAGAAATGGTTCTCTTTATTCTATAATCATGGATCCATCACTATCCATATCTAAATTTCAAATGCAAGTGTTTAAATCTCCACCTGATTTGGATAAAAAATCACTTTTCCCACCTGCAAGATGGAAAATTATGGGAGTACTTAACTCAGATTATACTTGTGGGCCACCTTTGAAAGTTGAACCGTCACAATTTCCAGAACCTAGAGGACTTGAGGCTACTGTTTTTGCTATTTCTACTTGGCAAATTGTTTGCAATATATCGAAACCGAAACAGAGGAAAACTAGATGTTGTGTCACTTTCTCTGCATACTATAATGATTCTGTTGTTCCTTGTAACACATGTGCTTGCGGTTGTGATAACGACGATGGTTATTATGATGGAAAAAAAAATCATCGGTGTGATCCGAACGCTAAAGCAATGCTACTTCCTTCGGAAGCTCTTCTTGTACCATATGATAATAGAACACTAAAAACAATTGCTTGGGCTAAGTTAAAGCATTTTCGCGTACCGAAAAAATTACCATGTGGAGATAACTGTGGAGTTAGCATAAATTGGCATATAGTTTCGGATTATAAAGGTGGATGGAGTGCTAGAATTACTCTTTTCAATTGGAAATCTTTTCAATTTAAGGATTGGTTCACTGCCTTGCAGTTCAAGAAAGGTGCTTCTCGCGGGTTTGAGAAAGTTTATTCTTTTAATGGTTCATTCCTTTCAAAAATCAATAACACTATTTTCATGCAAGGAGTGTTGGGATATGGAACAAATTATTTGATAGGACAAGACAATGATACCAATCCAAAGATTCCTGGAAAACAACAATCTGTTATTTCTTTTACCAAAAAATTTACACCAGAGATGAAAATTGCAAAAGGAGATGGGTTCCCTTCAAAGGTAATTTTCAATGGAGAGGAGTGTTCTATTCCTACTCAATTTCCAATGCAAAGTGGAAATCGACATAATGTATATTTAGTACAAGAAATCTTAGCCTTAGTTTTAGTTTTTACAATGAATCAAATATTGTTTTAG 1980 0.3576 MSNVWICELLSLVTLLVSYNVFVCECQDPEALPKEAEDCNGVFISYDLLDRRKEFPRVKNVTAQSWAFNATAKVLNTGKDVVKSWKLFIGFQHHEILVSASGGIPFETGDFPASVENGTTLVGSSLPDLESSINTAHDLSQIQALIQIAGTQFGVRPPGIPMPKSIKLENDGYKCPQPSVRKSSMFACCKSDPNYKSKLLKTKLLPRQKGDLTITYDILQAYDNNYNVEVTMENHNPLSRLDRWNLTFEWTRGEFIYSMKGAFTREMDSSKCIYGIAGQYYKDMDFTKVTNCQKNPIISDLPPEKYNDTEIGKIPFCCRNGSLYSIIMDPSLSISKFQMQVFKSPPDLDKKSLFPPARWKIMGVLNSDYTCGPPLKVEPSQFPEPRGLEATVFAISTWQIVCNISKPKQRKTRCCVTFSAYYNDSVVPCNTCACGCDNDDGYYDGKKNHRCDPNAKAMLLPSEALLVPYDNRTLKTIAWAKLKHFRVPKKLPCGDNCGVSINWHIVSDYKGGWSARITLFNWKSFQFKDWFTALQFKKGASRGFEKVYSFNGSFLSKINNTIFMQGVLGYGTNYLIGQDNDTNPKIPGKQQSVISFTKKFTPEMKIAKGDGFPSKVIFNGEECSIPTQFPMQSGNRHNVYLVQEILALVLVFTMNQILF* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6112 659 Pfam COBRA-like protein 226 405 IPR006918 GO:0010215|GO:0031225
Tpr2g6112 659 PANTHER COBRA-LIKE PROTEIN 7 9 656 - -
Tpr2g6112 659 PANTHER COBRA-LIKE PROTEIN 7 9 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6112 Tpr-Chr2 74084929 74087401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6112 33 654 COBRA Gene Family AT3G20580 55.962 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6112 - - mtr:MTR_5g005590 1104.35