Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6109 ATGATGGAGAAAGATAGAATTTCTTCAGCTATGATCATTATGCTAATCATTTTAATGTTAAAATCTGTTAACTTTGTTTCTGGTACAGAAAATCTTATAGATACATATTGTCCAGATAATTTTCCACTTTACACTTCCAGCACTTTATTCCAGAAGAATCTCAAGCTTCTCATGGAAACTCTATCCTCAAACATAGTAGCTTCAAACACAAGTTTCTTCAACAATACATCAACAGGAGAAGGACTAGACAAAGTGTATGGACAAGCACTATGCAGAGGAGACATAACAAACTCAACAGTTTGCAAAGAATGCATTGAGAAAGCAAGTAAAGATTTAATGAACAGGTGTAAGAGTGAAGATGCAATGATATGGTACGACGTTTGTCAAGTTCGGTACTCGTTTCAGATGTTTTTCTCAAACGCGGTTTATACCGGAAAATATCCAAAGCAGAATGATCTAGAGAAGCGCGTCTCGGATCCTACTAGTTTTCAACAAGTGTTGACTTATTTAATGAACAATGTCTCAAATGAGGCTGCTTTCAATCCTGCTAAGAACATGTTTGCAACTGCGGACATAGAGTTTTCTAAGAAGAAAAACGCGAGAATATATGGACTTGTTGAATGTACAAAGGACATTTCCGAAACGGACTGCAGGAGTTGTTTGAGTTCTGCAATCACAGAACTCAATGCATGCTGCTCATACAGGGAAGGAGGGATTATTGTTAGTCGAAATTGTAACGTTAGATTCGACCTGTTTGAGTTTTTTAATGCTTCTTCATCAGTAGCACCCCTTTTGATTTTCCCAACTTCCAAAGGAGGGAAATGGAAGCCTTGGATGTTTGTGTTGACTATATGTGGCTCAATTTTGATAATATCAGTTCTTATTGTGTTTTGCATCGCTTGCCTCCGGCAGAAAAAGGCCAGAGAGGGAGACGAAGAAAGAACTGAAAGGACACTATTACAAGAGTTGGCTAGCCCCAAGAATGTAGCAATCACACAAGAAGGTGAGTTGATCAGTTCTGATCAACTGTTCATGACTTTAGCAACCATTAAGGCGGCTACCGGCAACTTTTCTGATACGAATAAGCTGGGACACGGAGGGTTTGGTACAGTCTACAAGGGTGTTCTACCAGATGGTAATGAAATAGCAGTTAAAAGATTGTCAAGAAAGTCTTGGCAGGGCTTAGAAGAATTCAAAAATGAGGTTATTCTAATAGCTAAACTTCAACACAAAAATTTGGTGAAGTTGTTGGGCTGTGTCTTAGAAGGAGAGGAAAAGATACTCATATATGAACTCATGTCAAACAGAAGCCTTGATCAATTTATATTCGATCCATTCAAACGTCCTAAACTTGATTGGAAGACATGTTATGGCATCATCGGCGGCTTAGCAAAAGGACTTCTTTATCTGCACGAGGAGTCTCGGCTTAAAATCATTCACCGAGACCTAAAGCCAAACAATGTGTTGTTAGACCATGAACTAGTAGCCAAAATATCAGATTTTGGTATGGCCAGGATGTTTTCTGAGAATCAGAATACAGCAAACACAAAAAGAATTGTGGGAACACATGGATATATGGCTCCAGAATATGCAATGGAGGGACTATTCTCCGTGAAATCTGATGTCTTCAGCTTTGGCGTAATTATGCTTGAAATCATCAGTGGAAAAAGAAATAACGGCTTTTACACAACCAAACTTGCCCCGACTTTGCTGGCACATGCTTGGCGACTGTGGAACGAAGGAAACAGATTAGAAGTTGTGGATCCTATATTACTAGTATCGTGTCGTGATTCTGAATATGAAGTAGTTCTTAGGTGCGTTCATATTGCGCTCTTGTGTGTGCAGGAAGATCCGCAACACAGGCCGACCATGTCAAATGTTGTAGTTCTACTAGGAAGTGAATCAATGGATCTTCCCCAACCAAGACAACCAGCATTTTCATCGGGTAAGGCGATTCACGTAGATCCTACTGCATCAATAAATCATTCAGTGAATGAGAGTCTATGGTCTAATGTTACACCACGATGA 2028 0.3955 MMEKDRISSAMIIMLIILMLKSVNFVSGTENLIDTYCPDNFPLYTSSTLFQKNLKLLMETLSSNIVASNTSFFNNTSTGEGLDKVYGQALCRGDITNSTVCKECIEKASKDLMNRCKSEDAMIWYDVCQVRYSFQMFFSNAVYTGKYPKQNDLEKRVSDPTSFQQVLTYLMNNVSNEAAFNPAKNMFATADIEFSKKKNARIYGLVECTKDISETDCRSCLSSAITELNACCSYREGGIIVSRNCNVRFDLFEFFNASSSVAPLLIFPTSKGGKWKPWMFVLTICGSILIISVLIVFCIACLRQKKAREGDEERTERTLLQELASPKNVAITQEGELISSDQLFMTLATIKAATGNFSDTNKLGHGGFGTVYKGVLPDGNEIAVKRLSRKSWQGLEEFKNEVILIAKLQHKNLVKLLGCVLEGEEKILIYELMSNRSLDQFIFDPFKRPKLDWKTCYGIIGGLAKGLLYLHEESRLKIIHRDLKPNNVLLDHELVAKISDFGMARMFSENQNTANTKRIVGTHGYMAPEYAMEGLFSVKSDVFSFGVIMLEIISGKRNNGFYTTKLAPTLLAHAWRLWNEGNRLEVVDPILLVSCRDSEYEVVLRCVHIALLCVQEDPQHRPTMSNVVVLLGSESMDLPQPRQPAFSSGKAIHVDPTASINHSVNESLWSNVTPR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6109 675 SMART serkin_6 357 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6109 675 Pfam Salt stress response/antifungal 43 134 IPR002902 -
Tpr2g6109 675 Pfam Salt stress response/antifungal 158 250 IPR002902 -
Tpr2g6109 675 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 673 - -
Tpr2g6109 675 CDD STKc_IRAK 363 628 - -
Tpr2g6109 675 ProSiteProfiles Protein kinase domain profile. 357 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6109 675 Pfam Protein tyrosine and serine/threonine kinase 360 629 IPR001245 GO:0004672|GO:0006468
Tpr2g6109 675 Gene3D Phosphorylase Kinase; domain 1 320 432 - -
Tpr2g6109 675 Gene3D Transferase(Phosphotransferase) domain 1 433 640 - -
Tpr2g6109 675 SUPERFAMILY Protein kinase-like (PK-like) 341 631 IPR011009 -
Tpr2g6109 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Tpr2g6109 675 ProSiteProfiles Gnk2-homologous domain profile. 145 254 IPR002902 -
Tpr2g6109 675 Gene3D - 30 137 IPR038408 -
Tpr2g6109 675 Gene3D - 148 254 IPR038408 -
Tpr2g6109 675 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Tpr2g6109 675 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 673 - -
Tpr2g6109 675 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6109 Tpr-Chr2 74063020 74066097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6109 33 646 Receptor kinase-like Gene Family AT4G23230 42.381 6.94e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g6109 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6109 - - gmx:102669229 918.687