Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6108 ATGATTCATCATTTTACAGTTTTCAAATCCATTAAATTCTTCTTTCTTTTTTGTACTCTTGCATTCCTTTCACATGTTACCTTTGCAGATCCTCCATATGAAGTTTGTTCCACAAGAAAGGTTTATGCAAATCAAAGTTCCTTTGAGAACAATCTAAGTAACCTCCTTCTCTCTTTACCCTCTAATGTTTCAACTTCAATCTCCAAATTTGGTAATACTTCTTCAGGAATTGGCTTAGATAGAGCTTATGGACTCTACATGTGCCTCGACTTTGTTTCCAACGAAACATGCCATAAATGTGTAACAAACGCAATATCAGACGTTGTAAAACTATGTCCTCAATCAGAAGAAGCGGTCGTATATGAAGAGTTCTGTCAATTACGTTATTCCAATAAAAATTTCGTAGGCTCTTTAGATGTCACAGACAATATCGGTAAAGATAATGTTCAAAATATTTCAGAACCGGAGAAGTATGAATCTGTGGTGAATAAGATATTGAATAATCTTACTAAGATAGCGTCTTTTAATGTTTCTTCGAATATGTATGCTACTGGTGAAGTAAACTTTGAAGATAAAACAATATACGCGTTAGTGCAGTGTACTAGAGATTTATCAGACACTAATTGCAGTAGGTGTTTGCTAAGTGCTATAGGAGATATACCAGGTTGTTGCTATGCCTCCATTGGCGCAAGAGTTTGGAGTCGTAGTTGTTATTTAAGATATGAATTTTATCCTTTTTATCTTGGGGAAACAGATCAAACAAGTTCTTCAGCCAAACAAGGAAGGAAAAATAATTCAAGCAAAATATGGATGATTACATCCATTGCAGTTGGAGTAGGCTTGGTGATAATAATTTTCATTTGCTACTTGTGCTTTGTCAGGAACAAAAGGATTTGGCAAAGTAATAAAATATCTAAGGATTTCCCTTTTTTTGATCTTGGATCTCTTTGTGTGGCTACCGGAAATTTCTCCGATTCAAATATGCTCGGGCAAGGTGGATTTGGGCCTGTTTATAAGGGTATACTTAGTGATGGCATGGAAGTGGCAATCAAGAGGCTCTCAACTTGTTCCGAGCAGGGCTCAGAGGAGTTCATTAATGAGGTTATGTTGATATTGAAACTTCAACACAAAAATCTTGTGAAGCTTTTAGGATTTTGTGTTGATGGAGAAGAGAAACTTCTTGTATATGAATATTTGCCTAATGGTAGCCTTGATGTCGTCCTTTTCGAGCAAGGTGCACAGCTCGATTGGACAAAACGAGTTGATATAATAAATGGAATAGCAAGGGGAATTCTTTATCTTCATGAAGATTCTCGACTTCAAATAATACATAGAGATCTAAAAGCAAGCAACGTGTTGTTGGACTATGACATGAATCCAAAGATTTCAGACTTTGGAATGGCAAGAATATTTGCAGGAAGTGAAGGTGAAGCTAACACTGCTACAATAGTCGGCACATATGGATATATGGCTCCAGAGTATGCAATGGAGGGTATATATTCCATAAAATCTGATGTTTTTGGTTTTGGAGTACTATTGCTCGAGATCATTACAGGGAAACGTAACACAGGTTTCTATTACTCCAAAAGCACTCCTAGCCTTCTAGCATATGCATGGCATCTATGGAATGAGGGAAACGGATTGGAGTTAAGGGATCCGTTGTTATTATGCCCGGAAGACCAGTTTCTGAGATACATGAATATCGGACTACTTTGTGTTCAAGCAGATGCATTTGATAGGCCAACCATGTCTTCTGCTGTTTTGATGTTGATGAATGAATCTGTAACGCTTGGTCCGCCAGAAAAGCCTCCTTTCTCTGTAGGAAGACTGAATGTTAATGATCCAAATGTGCTAGATTCGGAAGATTGCTCAGTCGATTATAATTTCTTAACTGTTTCTGATATCTTGCCCCTGCAATGTCCATGA 1926 0.3733 MIHHFTVFKSIKFFFLFCTLAFLSHVTFADPPYEVCSTRKVYANQSSFENNLSNLLLSLPSNVSTSISKFGNTSSGIGLDRAYGLYMCLDFVSNETCHKCVTNAISDVVKLCPQSEEAVVYEEFCQLRYSNKNFVGSLDVTDNIGKDNVQNISEPEKYESVVNKILNNLTKIASFNVSSNMYATGEVNFEDKTIYALVQCTRDLSDTNCSRCLLSAIGDIPGCCYASIGARVWSRSCYLRYEFYPFYLGETDQTSSSAKQGRKNNSSKIWMITSIAVGVGLVIIIFICYLCFVRNKRIWQSNKISKDFPFFDLGSLCVATGNFSDSNMLGQGGFGPVYKGILSDGMEVAIKRLSTCSEQGSEEFINEVMLILKLQHKNLVKLLGFCVDGEEKLLVYEYLPNGSLDVVLFEQGAQLDWTKRVDIINGIARGILYLHEDSRLQIIHRDLKASNVLLDYDMNPKISDFGMARIFAGSEGEANTATIVGTYGYMAPEYAMEGIYSIKSDVFGFGVLLLEIITGKRNTGFYYSKSTPSLLAYAWHLWNEGNGLELRDPLLLCPEDQFLRYMNIGLLCVQADAFDRPTMSSAVLMLMNESVTLGPPEKPPFSVGRLNVNDPNVLDSEDCSVDYNFLTVSDILPLQCP* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6108 641 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Tpr2g6108 641 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 79 634 - -
Tpr2g6108 641 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Tpr2g6108 641 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Tpr2g6108 641 Gene3D Phosphorylase Kinase; domain 1 289 398 - -
Tpr2g6108 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Tpr2g6108 641 Gene3D Transferase(Phosphotransferase) domain 1 399 596 - -
Tpr2g6108 641 SMART serkin_6 323 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6108 641 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Tpr2g6108 641 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 79 634 - -
Tpr2g6108 641 Pfam Protein tyrosine and serine/threonine kinase 327 585 IPR001245 GO:0004672|GO:0006468
Tpr2g6108 641 CDD STKc_IRAK 329 592 - -
Tpr2g6108 641 Gene3D - 143 246 IPR038408 -
Tpr2g6108 641 Gene3D - 31 134 IPR038408 -
Tpr2g6108 641 ProSiteProfiles Protein kinase domain profile. 323 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6108 641 SUPERFAMILY Protein kinase-like (PK-like) 300 590 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6108 Tpr-Chr2 74059206 74062190 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6108 8 605 Receptor kinase-like Gene Family AT4G05200 44.094 1.84e-163 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g6108 PK_Tyr_Ser-Thr 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6108 - - gmx:102669364 905.205