Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6107 ATGGCTTGGCCTAAACCACTAGTATTTCTTTTTATTTCCATTATTATTATTATGAGTTTCACAAACTTTGGTAACACTAAAGCAGAGGACACTCCTGTCTATCTCTGGAAAAACTGTTCAACCAACAGTAGTACAACCACCGCCAACAGCCCCTTTCAACTCAATCTAAACACTCTCCTCACTTCCCTCTCATCCAACCCCACCGAATTCCACAACACCACCGTCACAGGAAATCCCTCCTCCAACACTGTCTACGGTCTCTTCATGTGCAGAGGTGACGTGGCACTCCCTCTCTGCCGACAGTGCGTTCTAAACGCAACACAGACACTCCTCTCAGAATGTTCCCTTTCCAAACAGGCAGTGATATGGTACGACGAGTGTACCGTACGCTACTCAAACCGTTCCTTTTTCTCCACCTTTGATACTAGACCTCGTGTTGGTCTACTCAACTCAGCTAACATAACCAATCAACAAAGCTTCATGCGTTTATTGTTTCGAACTATGAATAAAACTGCTGATGATGCTTCTAATCATCCAATTGGTTCTAAGAAATATGCTACAAATCAAGCTACTATATCTGGTTTTCAGAATTTGTATTGTTTGGCTCAGTGTACGCCTGATTTGTCACCTCAAGATTGTAGAAAGTGTCTTAATGGTGTCATTGGGGACCTTCCTTGGTGTTGTACGGGAAAACAAGGTGGAAGAGTTTTATATCCTAGCTGTAATGTTAGGTATGAATTGTACCCTTTTTTTCGAGTAGACAATGCTTCGTCGCCATCTCCTTCATCGTCAATTCTTCCTCCTCCAACTACTAATCCGGCTAATTCCCGAGGAGGCAGCAGTGGGATATCAGGCGGGACAATTGTTGCAATTGTAATTCCAATCATAGTTGTTGTGCTTCTGTTTATAGTGGCCATTTGTTTCTTGAGTAAAAGGGCAAGGAAGAAGCGTGATTCTCTACAAGATGGAAACACTGCAAATGATATCACCACTATGGAGTCCTTGCAATTTGATTTCAGCACCATTGAAGCAGCCACCAACAAATTCTCTGCAGATAACAAGTTGGGTGAAGGTGGATTTGGTGAAGTTTTTAAGGGAACTCTTCCAAATGGACAAGAAATAGCTGTCAAGAGACTCTCCAAAAGTTCGGGACAAGGTGGAGCAGAATTTAAGAATGAAGTTGTCGTAGTTGCCAAGCTTCAACACAGAAATTTGGCTAGGCTTCTTGGATTTTGCTTGCAAGGAGAGGAAAAAATACTTGTTTATGAATATGTAGCCAACAAAAGTTTGGACTATACTCTTTTTGATCCTGAAAAGCAAGGGAAACTAGATTGGGCAAAGCGGTACAAGATTATTGTAGGGATCGCTCGTGGCATGCAATATCTTCATGAAGATTCTAGGCTTAGAATTATACACCGTGATCTTAAAGCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATAGTTGGAGTTGATCAAACCCAAGGAAACACTAGCAGAATTGTAGGAACTTATGGTTACATGGCTCCAGAGTATGCAATGCATGGAGAATTTTCAGTAAAGTCTGATGTATACAGTTTTGGAGTTCTCATTATGGAGATTATAAGTGGCAAGAAAAATAGCTCTTTCTATGACACTGATGGTGCTGATGATCTAGTGAGCTATACGTGGAAAGTTTGGAAAGAAGGAGCACCATTAGAACTAGTGGACCCTATATTAAGAGAAAAAATTACTCCAAATGAAGTTATCAGAAGCATCCATATTGGTTTGCTTTGTGTTCAAGAAGATCCAAGTGACAGACCAACAATGACATCAATAGTTCTTATGCTTGACAGTAACACAGTTACTCTTCCAACTCCAAAGCAGCCTGCATTTTTCCTCAACAGTGATCCAAACAGGCCGAAGGAGCTTCGATTTGATTCTTCTACAACAAAGTCAATAACAACTTCTGTGAATGAGATGTCAATTAGTGAAATGGATCCGCGATAA 2019 0.4076 MAWPKPLVFLFISIIIIMSFTNFGNTKAEDTPVYLWKNCSTNSSTTTANSPFQLNLNTLLTSLSSNPTEFHNTTVTGNPSSNTVYGLFMCRGDVALPLCRQCVLNATQTLLSECSLSKQAVIWYDECTVRYSNRSFFSTFDTRPRVGLLNSANITNQQSFMRLLFRTMNKTADDASNHPIGSKKYATNQATISGFQNLYCLAQCTPDLSPQDCRKCLNGVIGDLPWCCTGKQGGRVLYPSCNVRYELYPFFRVDNASSPSPSSSILPPPTTNPANSRGGSSGISGGTIVAIVIPIIVVVLLFIVAICFLSKRARKKRDSLQDGNTANDITTMESLQFDFSTIEAATNKFSADNKLGEGGFGEVFKGTLPNGQEIAVKRLSKSSGQGGAEFKNEVVVVAKLQHRNLARLLGFCLQGEEKILVYEYVANKSLDYTLFDPEKQGKLDWAKRYKIIVGIARGMQYLHEDSRLRIIHRDLKASNILLDGDMNPKISDFGMARIVGVDQTQGNTSRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLIMEIISGKKNSSFYDTDGADDLVSYTWKVWKEGAPLELVDPILREKITPNEVIRSIHIGLLCVQEDPSDRPTMTSIVLMLDSNTVTLPTPKQPAFFLNSDPNRPKELRFDSSTTKSITTSVNEMSISEMDPR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6107 672 Gene3D Phosphorylase Kinase; domain 1 310 424 - -
Tpr2g6107 672 SMART serkin_6 349 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6107 672 CDD STKc_IRAK 355 621 - -
Tpr2g6107 672 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 670 - -
Tpr2g6107 672 MobiDBLite consensus disorder prediction 649 672 - -
Tpr2g6107 672 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Tpr2g6107 672 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Tpr2g6107 672 ProSiteProfiles Protein kinase domain profile. 349 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g6107 672 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 670 - -
Tpr2g6107 672 Gene3D - 33 136 IPR038408 -
Tpr2g6107 672 Gene3D - 145 250 IPR038408 -
Tpr2g6107 672 Pfam Protein tyrosine and serine/threonine kinase 351 618 IPR001245 GO:0004672|GO:0006468
Tpr2g6107 672 MobiDBLite consensus disorder prediction 651 666 - -
Tpr2g6107 672 SUPERFAMILY Protein kinase-like (PK-like) 334 649 IPR011009 -
Tpr2g6107 672 ProSiteProfiles Gnk2-homologous domain profile. 142 250 IPR002902 -
Tpr2g6107 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Tpr2g6107 672 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Tpr2g6107 672 Gene3D Transferase(Phosphotransferase) domain 1 425 629 - -
Tpr2g6107 672 ProSiteProfiles Gnk2-homologous domain profile. 34 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6107 Tpr-Chr2 74052359 74056752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6107 8 672 Receptor kinase-like Gene Family AT4G05200 53.509 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g6107 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6107 - - vun:114173511 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0541 1 4545285 4550286 Tpr2g6107 2 74052359 74056752 PCT