LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g6106	ATGATCCAAAACAAAACCATGATAATGATTACTACAACCTCAAAACAGATCTTTGCAACCTTGTTTGTCTTGCTGCTATATCTAACCTTAGCAACAGAAGCATCATCTCCCACATACATCGGTTCTTACTGCAACAACAACACAACATATTTACCAAACAGCACACTAAATACAAACCTCAATGTTCTCCTCAATTCTCTTACCACAAACGCTTCCCAACAACAAGACGGTTATTACATGACAATCATGGGTTTCGGAACAACTAGCGCTGTTAACGGAAACTTTCTCTGTCGTGGCGACATCAACACAACAACTTGTCAAAACTGCGTTACTGACGCAGCTAAACAGATCAAACGCCGTTGTAACAACCAAACGGAAGCGGTTATTTGGTACGAAGAGTGTTTGATTCGTTACACAAATAGGTACTTTAAATTTTACAGCATAGAACCAAGATTGAATCCTAAAGAAGGTAGAAATGTTTCAGGCGTTGACTTTGACCGGTTCAATGAATCGGTTATTGGTTTGTTGAATGATTTGGCGGTTAAAGCCGCGAATTCAGCGACGGCGAAGAAATTTGCTACCGGAAATGTGAAAATAACGAGAAAGGGTATGAGGGTTTATGGGTCGGGGCAGTGTATTACGGATTTAACGAGTGGTCAGTGTGAGACATGTTTGAGAAATGCGATTGGAACTCTTCCACAGTGTTGTAGGAGTCAACAGGGTGCAGCTGCTATGCTTGCGTCATGTATTGTTAGATATCAACTCTATCCTTTTTACATCACATCTTCTTCAGGAAAAAATGGAGTTGGAACAAAAGCAATTCTCATAATTGTTTTTCTGGCCATTCTTCCAGTATTACTTTTAATTTTAGGCTGCTATTGCCAACGGAGAAGATCAAGGCAGAGACGTCGTGCAATGCTAAAGGAAAATTTTGGAGATGAACTTAAAACACTAGAGTCATTACAATTCAGTTTTGCTACAATTGAAGCTGCCACAAACAAATTTTCACATGTGAACGAGATAGGCAAAGGAGGATTTGGTGTTGTCTACAAGGGTGTTCTTTCTGATGGTCGAGAAATAGCAGTGAAAAAACTCTCACTAGGTTCAGGACAAGGTTCAATAGAATTTCAAAATGAAATTTTACTTATAGCCAAGTTACAACATAGGAATTTGGTGACTTTATTAGGATTCTGCTTAGAAGAACGGGAGAAAATGCTTATATACGAATATGTTCCTAATAAGAGTCTTGATTATTTTCTATTTGATTCCAAAAGGCACAGAGTGTTACATTGGTTTGAGCGTTATAAAATTATAGGAGGAATAGCACGAGGAATTCTTTATTTACATGAGTATTCAAGACTTAAAGTCATACATCGAGATCTCAAACCGAGCAATGTATTGTTAGATAACAATATGAATCCAAAAATATCAGATTTTGGTTTGGCAAGAATAGTTGCAATTGATCAAGAACAAGGAAGGACTAATAGAATTGTGGGAACATATGGTTATATGTCTCCAGAATACGCAATGCACGGACAATTTTCTGAGAAATCGGATGTGTTTAGTTTTGGAGTTATAATTCTTGAGATAGTTAGTGGAAAGAGAAATAGTCGCCCCATTGAATCACACGATTTTGAAGATCTCATAAGAACTGCTTGGAGACAATGGAGGAATCAAACGCCATTAGAAATGTTGGACCCCATTCTGAAAGAATCATTTACTCATAGTGAAGTTATTAAGTGCATTCAACTTGGTTTATTATGTGTTCAAGAAAATCCAGATGATAGACCTACAATGGCACAAGTTGTTTCATATCTCAGTAGTCTTTTAGTTGAATTGCCACTTCCACAAGAGCCACCAGCATCTTCCATGGATAGAGGAATGAAGTTAAACATAAAAACAAATGAGTCTAGATCGGGTCAATTTATTAGTCACTCTAACTCTACATCATCCTCAATCAATGACATGACTAAGAGTCAATTTTTCCCTCGATAA	1995	0.3744	MIQNKTMIMITTTSKQIFATLFVLLLYLTLATEASSPTYIGSYCNNNTTYLPNSTLNTNLNVLLNSLTTNASQQQDGYYMTIMGFGTTSAVNGNFLCRGDINTTTCQNCVTDAAKQIKRRCNNQTEAVIWYEECLIRYTNRYFKFYSIEPRLNPKEGRNVSGVDFDRFNESVIGLLNDLAVKAANSATAKKFATGNVKITRKGMRVYGSGQCITDLTSGQCETCLRNAIGTLPQCCRSQQGAAAMLASCIVRYQLYPFYITSSSGKNGVGTKAILIIVFLAILPVLLLILGCYCQRRRSRQRRRAMLKENFGDELKTLESLQFSFATIEAATNKFSHVNEIGKGGFGVVYKGVLSDGREIAVKKLSLGSGQGSIEFQNEILLIAKLQHRNLVTLLGFCLEEREKMLIYEYVPNKSLDYFLFDSKRHRVLHWFERYKIIGGIARGILYLHEYSRLKVIHRDLKPSNVLLDNNMNPKISDFGLARIVAIDQEQGRTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIILEIVSGKRNSRPIESHDFEDLIRTAWRQWRNQTPLEMLDPILKESFTHSEVIKCIQLGLLCVQENPDDRPTMAQVVSYLSSLLVELPLPQEPPASSMDRGMKLNIKTNESRSGQFISHSNSTSSSINDMTKSQFFPR*	665

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g6106	664	Gene3D	Transferase(Phosphotransferase) domain 1	411	614	-	-
	Tpr2g6106	664	Gene3D	Phosphorylase Kinase; domain 1	295	410	-	-
	Tpr2g6106	664	Pfam	Salt stress response/antifungal	44	140	IPR002902	-
	Tpr2g6106	664	Pfam	Salt stress response/antifungal	166	255	IPR002902	-
	Tpr2g6106	664	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	20	649	-	-
	Tpr2g6106	664	Pfam	Protein kinase domain	336	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g6106	664	ProSiteProfiles	Gnk2-homologous domain profile.	38	143	IPR002902	-
	Tpr2g6106	664	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	20	649	-	-
	Tpr2g6106	664	CDD	STKc_IRAK	341	609	-	-
	Tpr2g6106	664	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	456	468	IPR008271	GO:0004672\|GO:0006468
	Tpr2g6106	664	SUPERFAMILY	Protein kinase-like (PK-like)	320	628	IPR011009	-
	Tpr2g6106	664	Gene3D	-	36	143	IPR038408	-
	Tpr2g6106	664	Gene3D	-	157	258	IPR038408	-
	Tpr2g6106	664	ProSiteProfiles	Protein kinase domain profile.	335	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g6106	664	ProSiteProfiles	Gnk2-homologous domain profile.	148	258	IPR002902	-
	Tpr2g6106	664	SMART	serkin_6	335	606	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g6106	664	MobiDBLite	consensus disorder prediction	634	664	-	-
	Tpr2g6106	664	ProSitePatterns	Protein kinases ATP-binding region signature.	341	364	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g6106	Tpr-Chr2	74042730	74046706	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g6106	20	664	Receptor kinase-like Gene Family	AT4G05200	44.609	0.0	563

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Tpr2g6106		Pkinase	3.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g6106	-		-	cam:101500396	979.163