LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g6104	ATGTCTGCTGCAAAACATAAACTCCTTTCCATATGTCTGGGTATGATTCTGAACTTTTTCACGGCAACAAAAGCAACACCAACTTACACAACAACTCATTGCACAAACACAACAACTTATGCACCCAACACCACTTTCCAAACCAATCTCAACATCCTCTTCTATTATTTCTCCAACAATATCTCCCAATCCAACGGTTACTTTCTCTCCATCACCGGTTTCAACAGCGATAATGCCGTCGGAGGACTCTACCTCTGTCGCGGCGACGTCACCACCACAGTTTGCGATCAGTGTCTCGCCGCTGCTGTCAAAGAGATAAGAATTCGATGTCCGAATCAAACAGAGGCTCTGATTTGGTACGATGAGTGCTTCCTCCGTTACACAAATAGATATTTCGCCATCGATAAGATCGTTCCTAGAGCGAACTTCGATGACGGAAATATTTCCTCCGGCGTTGACTTGGGAAGATTCAACCGATCGCTGAATGGATTACTGAATGATTTGGCAACGGAAGCTGCGGCGAGTTTGCAGTCGAAGAAGTTCTCCGCCGGAGAAACTGCGGTGACGGAGTCGATGAAGTTGTATGGATTGGTGCAGTGCACGAATGACTTAACGAAAAGTGAGTGTGAGACGTGTTTGAGAAATGCAGTTGGAACTCTTCCTAGTGGAAAACAGGGCGCAAGAGCTTTGCTTCCGTCTTGTAATGTTAGATACCAGCTTTACCCTTTTTTCACTTTATCTTCAACATCTTCATCTTCAGGGGATGGCAAACTTGGACCCGGTACAATTGCGGTCGTGATTGTTGTACCCGTTGTTTTCTTAATTATCCTATTCTTAGGTTGCTACTATTTCAAGAGAAGGTCCAAGATGAAAAAGAGACTAATGCCTAATTTGATGGAAAATTTTGGGGATGAAATTCCAACATTGGAGTCATTGCAATTCAATTTGGCTACTCTTGAAGCAGCCACTAACCAGTTCTCATTTCAAAATAAGATTGGAAGCGGAGGATTTGGACAAGTTTACAAGGGGGTTTTACTAGATGGGCGACACATAGCTGTAAAAAAACTTTCAAAAAGCTCAGGACAAGGCACCATAGAATTTAAAAATGAGATTGTGTTAATAGCCAAACTACAACATAGAAATTTGGTAACCTTATATGGATTTTGCTCGGAAGAACAAGAAAAAATGCTTGTTTATGAATATGTGCCTAATAAAAGTCTTGATTACTTCTTATTCGATCCTAATAAAGGAAGAGTTTTGAGTTGGGATGAAAGATATAAAATCATAGGTGGAATTGCACGAGGAATTTATTACTTACATGAACAATCAAGACTTAAAGTTATACACCGTGATCTCAAACCTAGCAATATATTGTTAGATGAGATGATGAATCCAAAAATATCTGATTTTGGTATGGCAAAAATTATTGATATAGATCAACATCAAGGAAATACTAAAAGGATTGCTGGAACTTATGGTTATATGTCTTCCGAATATGCAATGCATGGACATTATTCAGAAAAATCAGATGTGTTTAGCTTTGGAGTCATACTTATAGAGATAATTAGTGCAAAGCGGAATGCACTTAGTATTGGTTCGCCGGTTTTTGATGACCTCTTGAGTTATGCTTGGAAAAATTGGAGGGATGAAAAACCGCTAGAAGTATTGGACTCTGATATAGAAAAATCGTTTTCTTACAGTGAAGTCATTAAATGTATTCAAATTGGTTTATTATGTGTCCAACAAAATCCAGATGATAGACCAACAATGGAAAGAGTTGTTTCATATTTGAGTAGTGTTTCAGTGGAATTACCATTGCCTCAAGAGCCTGCAGGTTTCATGGGTAATGGAACAAATCCAAGCATGATACCAAGGGATAAATCAGATCAACATAACAATAGTAATAGTAATAGTAATACTACGGGATCCTCAATCAATGATATGACCATGAGTCATTATTTTTCTCGATAG	1971	0.3881	MSAAKHKLLSICLGMILNFFTATKATPTYTTTHCTNTTTYAPNTTFQTNLNILFYYFSNNISQSNGYFLSITGFNSDNAVGGLYLCRGDVTTTVCDQCLAAAVKEIRIRCPNQTEALIWYDECFLRYTNRYFAIDKIVPRANFDDGNISSGVDLGRFNRSLNGLLNDLATEAAASLQSKKFSAGETAVTESMKLYGLVQCTNDLTKSECETCLRNAVGTLPSGKQGARALLPSCNVRYQLYPFFTLSSTSSSSGDGKLGPGTIAVVIVVPVVFLIILFLGCYYFKRRSKMKKRLMPNLMENFGDEIPTLESLQFNLATLEAATNQFSFQNKIGSGGFGQVYKGVLLDGRHIAVKKLSKSSGQGTIEFKNEIVLIAKLQHRNLVTLYGFCSEEQEKMLVYEYVPNKSLDYFLFDPNKGRVLSWDERYKIIGGIARGIYYLHEQSRLKVIHRDLKPSNILLDEMMNPKISDFGMAKIIDIDQHQGNTKRIAGTYGYMSSEYAMHGHYSEKSDVFSFGVILIEIISAKRNALSIGSPVFDDLLSYAWKNWRDEKPLEVLDSDIEKSFSYSEVIKCIQIGLLCVQQNPDDRPTMERVVSYLSSVSVELPLPQEPAGFMGNGTNPSMIPRDKSDQHNNSNSNSNTTGSSINDMTMSHYFSR*	657

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g6104	656	ProSiteProfiles	Protein kinase domain profile.	326	597	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g6104	656	CDD	STKc_IRAK	332	591	-	-
	Tpr2g6104	656	Pfam	Protein kinase domain	327	594	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g6104	656	ProSiteProfiles	Gnk2-homologous domain profile.	139	243	IPR002902	-
	Tpr2g6104	656	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	13	624	-	-
	Tpr2g6104	656	SMART	serkin_6	326	597	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g6104	656	ProSitePatterns	Protein kinases ATP-binding region signature.	332	355	IPR017441	GO:0005524
	Tpr2g6104	656	Gene3D	-	140	243	IPR038408	-
	Tpr2g6104	656	Gene3D	-	27	132	IPR038408	-
	Tpr2g6104	656	MobiDBLite	consensus disorder prediction	628	656	-	-
	Tpr2g6104	656	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	13	624	-	-
	Tpr2g6104	656	Gene3D	Transferase(Phosphotransferase) domain 1	402	605	-	-
	Tpr2g6104	656	SUPERFAMILY	Protein kinase-like (PK-like)	312	613	IPR011009	-
	Tpr2g6104	656	Gene3D	Phosphorylase Kinase; domain 1	287	401	-	-
	Tpr2g6104	656	Pfam	Salt stress response/antifungal	155	240	IPR002902	-
	Tpr2g6104	656	Pfam	Salt stress response/antifungal	34	129	IPR002902	-
	Tpr2g6104	656	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	447	459	IPR008271	GO:0004672\|GO:0006468
	Tpr2g6104	656	ProSiteProfiles	Gnk2-homologous domain profile.	28	132	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g6104	Tpr-Chr2	74028806	74036675	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g6104	8	656	Receptor kinase-like Gene Family	AT4G05200	44.444	0.0	546

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Tpr2g6104		Pkinase	1.5e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g6104	-		-	cam:101500396	954.896