Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6094 ATGCGCGGAAACGGAATCGGAATCGAAGAGCAGCGATGGGGATCAACCGCCGTACCAGCTCCGGGTATTATTCGGAAGAAAGGAACAAGTGTTCGTCCATGGTTAGTCGTGGAGGGTAGCGGAGATGCAGAGGTTGTTGAGGTCGGTAAACATGCCATCATGAGACGTACTGGACTCCCCGCTCGTGACCTTCGTATCCTTGATCCTCTTCTCTCTTACCCTTCCACCGTTCTCGGAAGAGAAAGAGCTATTGTCATCAATTTGGAACACATCAAAGCTATTATTACAGCTAACCAAGTTCTTCTTCTCAATTCAAGAGACCCTTCTGTTACTCCTTTCGTTCAAGAACTTCAAGCTAGGATCCTCCGTCATCACCAAGCTACTACTAATCATCATCCCGATGAAGGAGGAATTAAGATTCTTCCATTCGAATTTGTCGCTCTTGAAGCCTGTCTTGAAGCTGCTTGTAGCGTCTTGGAGAATGAAGCTAAGACGTTAGAGCAAGAAGCACATCCTGCTCTTGATAAATTGACATCCAAGATCAGTACTCTTAATTTGGAACGTGTTCGTCAAATTAAGAGCCGATTGGTTGCGATAACTGGTCGTGTTCAAAAAGTCAGAGATGAATTGGAACATTTGCTTGATGATGATGAAGATATGGCTGAGATGTATCTCACTGAAAAGTTACTTCAACAGCAATCACAACAAACTTCTTCTGAGGAAGACACTGTTGTTGATGATACTCGTCATGATGATGATGATAATAATGACATGGATATTCATCATAGAGCTGAAATATCATTGGAAGCAGGTGTAGGAGGAGGTGTGGCAAGTTATGAGGAGGAAGAAGACAATGATGATGATGATCATCGTAATCTAAGGGATATCCATGGAACACACGCAAGCACTGTCTACAGTGCCGCCACCATCAAGCTTGACGTTGAGGAGCTTGAGATGCTCTTGGAAGCATACTTCGTTCAGATTGATGGCACTCTCAACAAGCTCTCCACGCTGAGGGAGTATGTTGATGACACTGAGGATTACATCAACATAATGCTGGATGACAAACAGAACCATCTTCTCCAAATGGGAGTCATGTTGACCACGGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTGGCTGGTATTTTTGGCATGAATATTCATATTGAGCTGTTTGATGATAAATTGTATGGGATGAGGGAGTTTCTCTGGACTGTTGGTGGAGGCACTGCCGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGCACAAAGGCTTGCTAGAATAA 1299 0.4426 MRGNGIGIEEQRWGSTAVPAPGIIRKKGTSVRPWLVVEGSGDAEVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITANQVLLLNSRDPSVTPFVQELQARILRHHQATTNHHPDEGGIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLLQQQSQQTSSEEDTVVDDTRHDDDDNNDMDIHHRAEISLEAGVGGGVASYEEEEDNDDDDHRNLRDIHGTHASTVYSAATIKLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDDKLYGMREFLWTVGGGTAGTIFLYVVAIAWCKHKGLLE* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6094 432 PANTHER - 136 431 - -
Tpr2g6094 432 PANTHER - 22 130 - -
Tpr2g6094 432 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 22 130 IPR039204 -
Tpr2g6094 432 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 136 431 IPR039204 -
Tpr2g6094 432 MobiDBLite consensus disorder prediction 242 256 - -
Tpr2g6094 432 MobiDBLite consensus disorder prediction 230 256 - -
Tpr2g6094 432 Gene3D Magnesium transport protein CorA, transmembrane region 107 360 - -
Tpr2g6094 432 Gene3D - 23 105 - -
Tpr2g6094 432 Coils Coil 149 169 - -
Tpr2g6094 432 CDD Mrs2_Mfm1p-like 34 430 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6094 Tpr-Chr2 73957172 73961028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6094 34 432 MRS2 Gene Family AT3G19640 64.080 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6094 - - gmx:100819578 567.385