Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6093 ATGTCTTGTCCTGAACAACGGAGGGAATCTTCATTGAAATATCAAACCAGATGTGTACGCTGCTACCCAAATGGAACAGGATATGCACTTAGTTCCGTTGAAGGGAGGGTTGCAATGGAATTCTTTGACCTATCTGAAGCTAGCCAGGCAAAGAAATATGCTTTCAAGTGTCACAGAAAATCCGAAGCTGGAAGGGATATTGTCTACCCTGTAAATGCCATGGCATTCCACCCCATATATGGTACATTTGCCACAGGAGGTTGTGATGGTTTTGTTAATGTATGGGACGGAAACAACAAAAAGAGGCTGTATCAGTATTCAAAATACCCAACTAGCGTTGCTGCACTCTCATTTAGCAGAGATGGACGTCTCCTAGCTGTTGCGTCAAGTTACACTTTTGAAGAGGGACTGAAACCCCATGAACAAGATGCTATCTACGTTCGTAGCGTGAATGAAATTGAGGTCAAGCCAAAACCCAAAGCCCTTCCTAATCCTACAGCGTGA 504 0.4385 MSCPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAMAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSVAALSFSRDGRLLAVASSYTFEEGLKPHEQDAIYVRSVNEIEVKPKPKALPNPTA* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6093 167 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.2 1 162 - -
Tpr2g6093 167 PANTHER MRNA EXPORT FACTOR AND BUB3 1 162 - -
Tpr2g6093 167 Gene3D - 1 161 IPR015943 GO:0005515
Tpr2g6093 167 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 11 130 IPR011047 -
Tpr2g6093 167 SMART WD40_4 48 96 IPR001680 GO:0005515
Tpr2g6093 167 ProSiteProfiles Trp-Asp (WD) repeats profile. 71 105 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6093 Tpr-Chr2 73954605 73957183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6093 15 138 U-box Gene Family AT2G33340 26.613 2.61e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6093 K02180 - cit:102608840 328.946