Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6054 ATGGGTGCATACAAGTATGTTTCCGAGTTATGGCGCAAGAAACAATCAGATGTGATGGGATTCGTGCAGCGTGTTAGGTGCTGGGAGTATCGTCAACAATCTTCCATTGTTCGTCTCACCAGGCCTACTCGTCCTGACAAAGCTCGCCGTTTGGGTTACAAGGCCAAACAGGGATATGTTATTTACCGTGTTCGCGTCCGTAGAGGTGGCCGAAAGAGGCCAGTTTCCAAGGGTATTGTTTATGGTAAACCAACCAACCAGGGAGTTACCCAACTCAAGTTTCAGAGGAGTAAAAGGTCAGTTGCTGAGGAGCGTGCTGGACGTAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTCAATGAGGATTCCACCTTCAAATATTTTGAGGTCATTTTGGTTGATGTTGCACACAGTGCTATAAGAAATGACCCAAGAATCAACTGGCTCAACAATCCTGTCCACAATCACAGGGAACTTCGTGGCCTCACCTCTGCTGGGAAAGAAAACAGAGGTTTGCGTGGCAAGGGGCATCGACACCACAAAGCTCGTCCATCCCGCAGGGCCAACTGGAAGAGAAACAATACCCTTTCTCTTCGTCGCTACCGTTGA 615 0.4894 MGAYKYVSELWRKKQSDVMGFVQRVRCWEYRQQSSIVRLTRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTFKYFEVILVDVAHSAIRNDPRINWLNNPVHNHRELRGLTSAGKENRGLRGKGHRHHKARPSRRANWKRNNTLSLRRYR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6054 204 MobiDBLite consensus disorder prediction 174 190 - -
Tpr2g6054 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Tpr2g6054 204 Pfam Ribosomal L15 2 191 IPR000439 GO:0003735|GO:0005840|GO:0006412
Tpr2g6054 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Tpr2g6054 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Tpr2g6054 204 MobiDBLite consensus disorder prediction 161 204 - -
Tpr2g6054 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Tpr2g6054 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Tpr2g6054 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6054 Tpr-Chr2 73605410 73607002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6054 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 87.255 6.39e-121 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6054 K02877 - twl:119986447 372.474