Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6053 ATGGATTCGTTTGACGCTGACACAAATGGAAATGGGACAAATGGAAATGGGACGGAGGAGTCTTTGCCTCCGCCACCTCCAGTTGTCCCCTCAGATGTGGTACCTCTCAAAGCAGAGGAGGTGATCCCAGCCCCTCCTGAACCTGTGAAGAAAAAAATTACCCGACTTCCAATAGCCAGACGTGGTCTGGGATCAAAAGGAAATAAGATACCTCTTTTAACTAATCACTTCAATGTTAATATTGGTAACAATGATGGATTTTTTTTCCAGTACAGTGTGTCTTTTGCTTATGAAGATGGAAGCCCTGTGGAAGCTAAGGGTGTCGGAAGGAAGATAATGGATAGGGTGCAGGAGACATATGCTTCTGACTTGAATGGCAAGCAATTTGCTTATGACGGGGAGAAAAGTCTGTTTACTATCGGCTCTCTTCCTCAAAACAAACTTGAGTTTGAAATTGTTCTAGAGGATGTTACATCTAACAGAAATAATGGCAATCGTAGTCCTGATGCTAATGGGGACAATGAGAGTGACAAAAAGAGGGTGCGACGCCCGTACCATGCAAAGACATTTAAAGTTGAGATTAGCTTTGCTACTAAAGTTCCTATGTATGCCATTGCCAATGCATTACGCGGACAGGAAACGGAGAATTTCCAAGAAGCTGTTAGAGTTCTTGATATCATATTGAGGCAACATGCTGCCAAGCAGGGCTGCCTACTTGTGCGCCAGAATTTCTTCCACAATGATCCCAAGAATTTTGCTGATGTGGGGGGTGGTGTTCTAGGCTGTAGAGGATTCCATTCAAGTTTTAGAGCTACACAAAGCGGGCTATCTCTTAACATAGATGTCTCAACTACTATGATAATTCAACCTGGCCCTGTGGTGGATTTCTTAATTTCCAATCAAAATGTGAGAGATCCTTTTGGTCTTGACTGGACAAAGGCCAAAAGGACACTAAAAAATCTGAGGGTTAAAACTCATCCATCCAATCAAGAGTTTAAAATTTGTGGACTCAGTGAAGTCCCATGCAAAGAGCTTACTTTTACTTTGAAGAAAAGGGATGGGGATGGTACTGAAGAAATGACTGTTTTGGACTATTTTACTAATGTCCGGAAGATAGATCTGCGCTACTCTGCTGATCTTCCATGTATTAATGTTGGCAGGCCTAAGCGACCGACATATTTCCCGATTGAGCTGTGTGAATTGGTATCGTTACAACGATATACAAAAGCTCTGTCTACCCTTCAAAGGGCGTCCTTGGTGGAGAAATCCAGACAGAAGCCAAAAGAGAGGATGACAATTTTGTCGGATGCGCTTAAAACCAGCAACTATGGTGCTGAACCTCTGCTACGAAGTTGTGGAATTTCTATAAGCACAGGCTTTACTCAAGTGGAGGGACGTGTTTTGCCTGCTCCCAGGTTGAAGTTTGGAAATGGTGAAGATTTCAATCCAAGAAACGGAAGATGGAACTTCAACAACAAGAAATTTGTGCAGCCTACAAAGATAGAGAAATGGGCCGTGGCTAACTTTTCTGCACGATGTGATGTGCGAGGACTTGTGAGGGATATCATTAGAATTGGAAATATGAAAGGAATTATGATTGACCCACCTTTTGATGTGTTCGAAGAAAATCCTCAGTTTAGACGTGCCCCACCAATGGTTAGAGTGGAGAAGATGTTTGAGGATATTCAGTCTAAACTTCCTGGGGCTCCTCAGTTCCTTCTCTGTTTGCTTCCTGATCGAAAAAACTGTGATATTTATGGTCCATGGAAAAAGAAGAATCTTGCTGATTATGGAATCGTTAATCAGTGCATGTGTCCTCTAAGAGTCAATGATCAGTATCTGGGCAATATTATGTTGAAGATCAATGCCAAGCTTGGTGGGTTGAACTCATTGTTGGGTGTTGAAAGTACTCCTTCTCTTCCTATTGTTTCCAAAGCACCCACTCTCATTCTAGGAATGGATGTATCACATGGCTCACCAGGGCAGACTGATATTCCTTCAATTGCGGCTGTTGTTAGCTCTAGACAGTGGCCTCTGATTTCAAAATATAGAGCTTGTGTCCGCACACAGTCTGCAAAAGTTGAAATGATAGATAATTTGTTCAAGAAAGTATCAGATACCGAGGATGAAGGCATCATAAGGGAACTCTTACTCGATTTCTATAATAGTTCTGGCAAGAGAAAACCAGATAACATTATCATTTTCAGGGACGGTGTTAGCGAATCCCAATTCAATCAAGTCCTGAATATCGAACTTGACCAGATCATCGAGGCGTGCAAATTTCTTGATGAAAAATGGAACCCCAAATTTGTGGTCATTGTTGCTCAGAAGAACCACCACACAAGATTCTTCCAGACCAATTCTCCTGACAATGTCCCACCTGGAACTGTTATTGATAACAAAATATGTCATCCAAGAAATTATGATTTCTACCTCTGTGCTCATGCTGGGATGATAGGCACCAGCAGGCCTACTCACTACCATGTGCTGCTTGATGAGATTGGTTTCTCCCCTGATGAACTTCAGGAGCTTGTTCATTCTCTATCATATGTTTACCAGAGGAGCACCACAGCTATTTCAGTTGTTGCACCTATATGCTATGCACACTTGGCTGCAACTCAGTTGGGACAGTTCATGAAATTCGAGGATAAATCTGAGACATCCTCAAGCCATGGTGGGCTAAGTGCTGCAGGAGCTGTACCTGTCCCTCAGCTCCCAAAATTGCAGGACAACGTAGCAAACTCTATGTTTTTCTGCTGA 2760 0.4261 MDSFDADTNGNGTNGNGTEESLPPPPPVVPSDVVPLKAEEVIPAPPEPVKKKITRLPIARRGLGSKGNKIPLLTNHFNVNIGNNDGFFFQYSVSFAYEDGSPVEAKGVGRKIMDRVQETYASDLNGKQFAYDGEKSLFTIGSLPQNKLEFEIVLEDVTSNRNNGNRSPDANGDNESDKKRVRRPYHAKTFKVEISFATKVPMYAIANALRGQETENFQEAVRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFADVGGGVLGCRGFHSSFRATQSGLSLNIDVSTTMIIQPGPVVDFLISNQNVRDPFGLDWTKAKRTLKNLRVKTHPSNQEFKICGLSEVPCKELTFTLKKRDGDGTEEMTVLDYFTNVRKIDLRYSADLPCINVGRPKRPTYFPIELCELVSLQRYTKALSTLQRASLVEKSRQKPKERMTILSDALKTSNYGAEPLLRSCGISISTGFTQVEGRVLPAPRLKFGNGEDFNPRNGRWNFNNKKFVQPTKIEKWAVANFSARCDVRGLVRDIIRIGNMKGIMIDPPFDVFEENPQFRRAPPMVRVEKMFEDIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADYGIVNQCMCPLRVNDQYLGNIMLKINAKLGGLNSLLGVESTPSLPIVSKAPTLILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKKVSDTEDEGIIRELLLDFYNSSGKRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFVVIVAQKNHHTRFFQTNSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSAAGAVPVPQLPKLQDNVANSMFFC* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6053 919 MobiDBLite consensus disorder prediction 1 30 - -
Tpr2g6053 919 Gene3D - 639 919 IPR036397 GO:0003676
Tpr2g6053 919 SMART Piwi_a_2 572 880 IPR003165 GO:0003676
Tpr2g6053 919 ProSiteProfiles PAZ domain profile. 315 403 IPR003100 GO:0005515
Tpr2g6053 919 MobiDBLite consensus disorder prediction 159 182 - -
Tpr2g6053 919 Pfam PAZ domain 294 419 IPR003100 GO:0005515
Tpr2g6053 919 Pfam Argonaute linker 2 domain 429 475 IPR032472 -
Tpr2g6053 919 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 918 - -
Tpr2g6053 919 Pfam N-terminal domain of argonaute 69 228 IPR032474 -
Tpr2g6053 919 SUPERFAMILY PAZ domain 285 443 IPR036085 GO:0005515
Tpr2g6053 919 MobiDBLite consensus disorder prediction 1 19 - -
Tpr2g6053 919 Pfam Mid domain of argonaute 482 562 IPR032473 -
Tpr2g6053 919 SMART DUF1785_2 238 290 IPR014811 -
Tpr2g6053 919 Gene3D - 467 633 - -
Tpr2g6053 919 SUPERFAMILY Ribonuclease H-like 557 878 IPR012337 -
Tpr2g6053 919 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 918 - -
Tpr2g6053 919 CDD PAZ_argonaute_like 290 402 - -
Tpr2g6053 919 Pfam Argonaute linker 1 domain 240 288 IPR014811 -
Tpr2g6053 919 Gene3D paz domain 284 407 - -
Tpr2g6053 919 Pfam Piwi domain 573 880 IPR003165 GO:0003676
Tpr2g6053 919 ProSiteProfiles Piwi domain profile. 572 880 IPR003165 GO:0003676
Tpr2g6053 919 CDD Piwi_ago-like 447 874 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6053 Tpr-Chr2 73592453 73599891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6053 60 919 Eukaryotic Initiation Factors Gene Family AT5G43810 35.714 1.35e-171 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6053 K11593 - gmx:100820376 1597.02