Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6047 ATGGCTACCACCGGTGATGTTGGTGTTGTTGGTGAGTTACACGTCCTTGCTGTGGATGATAGTTTTGTTGATCGTAAAGTTATTGAAAGGTTGCTCAAATTCACTTCTTGCAAAGTGACTGTGGTAGAGAGTGGAACTAGAGCTTTACAGTATCTGGGATTGGATGGTGATACGAGTTCCATTGGTTTTGATGGTGTGAAGGTTAATATGATAATGACAGATTATTCCATGCCTGGGATGACAGGATATGAATTACTTAAGAAGATTAAGCAGGAATCATCTGTTTTTAGAGAGATTCCAGTGGTGGTTATGTCCTCTGAGAATATCTTAACCCGAATCGATAGTTGTTTGGAGGAAGGAGCAGAGGAGTTTCTATTGAAACCTGTCAAGTTATCAGACGTGAAACGCTTAACAGATTTCATCATGAGTGGTGAAGGGAAGAAAGTTGGAGGAAAAAGATCTCAAAAAAGAAACCGGTCAGATGATTGCATTTCATCTCTATCAACGACATGCTCAACCGTTTCTCATCCATGCGATCTATCATCACTATCACCGTCTGCTATGTCATCAAAGAAATCTAGACTATGA 588 0.4014 MATTGDVGVVGELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTDFIMSGEGKKVGGKRSQKRNRSDDCISSLSTTCSTVSHPCDLSSLSPSAMSSKKSRL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6047 195 Pfam Response regulator receiver domain 15 135 IPR001789 GO:0000160
Tpr2g6047 195 Gene3D - 13 168 - -
Tpr2g6047 195 CDD REC_typeA_ARR 15 137 - -
Tpr2g6047 195 ProSiteProfiles Response regulatory domain profile. 14 142 IPR001789 GO:0000160
Tpr2g6047 195 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 195 IPR045279 GO:0009736
Tpr2g6047 195 SMART REC_2 13 138 IPR001789 GO:0000160
Tpr2g6047 195 SUPERFAMILY CheY-like 12 140 IPR011006 -
Tpr2g6047 195 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 10 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6047 Tpr-Chr2 73520841 73523634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6047 13 167 Response Regulator Gene Family AT3G48100 69.872 9.70e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g6047 Response_reg 2.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6047 K14492 - gmx:100819165 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2966 5 52644522 52646803 Tpr2g6047 2 73520841 73523634 ECH
Tpr2g6047 2 73520841 73523634 Tpr2g6047 2 73520841 73523634 ECH