Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6039 ATGGCGATAACAGTACCAAGTATACAATTATTCATTGATGGAGAGTGGAAAGCTCCTATCCTCAATATAAGAATTCCAATCATCAATCCCTCCACTGAAAACATCATAGGGGATATACCTGCTGCTACTAAGGAAGATGTTGACTTTGCTGTGGAGGCTGCTAAAAGAGCCTTGTCTCGGAAAGGTAGAGATTGGTCTACTGCTTCTGGCTCCGTTCGTGCTGGCTATCTTCGAGCCATCGCTGCAAAGATAACTGAGAAAAAAAATGAACTAGGCAAACTGGAATCAATTGATAGTGGAAAACCACTGGAGGAAGCACTCGCGGATCTGGATGATGTTATTGCTTGTTTTGAGTACTATGCCGGGCTTGCTGAAGGGTTAGATGCAAAGCAAAAGACTCCTGTATCTCTTCCTATGGATACCTTCAAGAGTCATGTTCTCAAGGAGCCTATTGGTGTTGTTGCGTTAATTACTCCATGGAACTATCCTCTCTTAATGGCAACATGGAAAGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTAGCATCTGTGACCTGTTTGGAGTTAGGCGAAATATGTAGAGAAGTTGGCCTTCCTCCTGGTGTCTTAAATATTCTCTCTGGATTAGGCCATGAAGCTGGTGCTTCTTTAGCATCTCATCCTGACGTAGATAAGATTGCCTTTACTGGTAGCTCTGCAACTGGGAGCAGGATTATGACAGCTGCGGCGCAGCTAATCAAGCCTGTTTCACTCGAGCTTGGTGGAAAGAGCCCAATCCTTGTTTTTGAGGATGTTGACCTTGATAAGGTTGCTGAATGGACCATCTTTGGCTGCTTCTTTACAAATGGTCAGATATGCAGTGCAACATCTCGCCTTATTGTGCATGAAAGTATAGCAAAAAAATTTGTGAATAAACTTGTGAAATGGGCCGAAAACATCAAAATTTCTGATCCGTTGGAAGAAGGTTGCAGGCTAGGCCCTATTGTCAGTGAAGCACAGTATAAGAAAGTATTGAATTTTATCGCAACGGCTAAGAGCGAGGGTGCAACAATTTTGACTGGTGGGCGTCGGCCAGAGCATTTACAGAAGGGATACTTTGTTGAACCAACCATTGTATCCGATGTGACTACCTCAATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTACTCTCTGTTAAAACATTTAGCACTGAAGAAGAAGCTATTGATCTAGCAAATGACACACACTATGGCTTGGGGTCAGCTGTAATGTCAAATGATTTAGAAAGATGTGAACGCGTATCTCAGGCTCTACAAGCTGGAATTGTATGGATCAATTGTGCTCAACCAAGCTTTATTCAAGCTCCATGGGGAGGCATTAAACGGAGCGGTTTTGGTCGCGAATTAGGAGAATGGGGACTTGATAACTACTTGAGTGTGAAGCAAGTTACGACGTACATATCTGGTGATCAGTGGGGCTGGTATCAATCCCCTTCAAAGCTGTGA 1509 0.4361 MAITVPSIQLFIDGEWKAPILNIRIPIINPSTENIIGDIPAATKEDVDFAVEAAKRALSRKGRDWSTASGSVRAGYLRAIAAKITEKKNELGKLESIDSGKPLEEALADLDDVIACFEYYAGLAEGLDAKQKTPVSLPMDTFKSHVLKEPIGVVALITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNILSGLGHEAGASLASHPDVDKIAFTGSSATGSRIMTAAAQLIKPVSLELGGKSPILVFEDVDLDKVAEWTIFGCFFTNGQICSATSRLIVHESIAKKFVNKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNFIATAKSEGATILTGGRRPEHLQKGYFVEPTIVSDVTTSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLERCERVSQALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTTYISGDQWGWYQSPSKL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6039 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 482 IPR016162 GO:0016491
Tpr2g6039 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 457 IPR016163 GO:0016620
Tpr2g6039 502 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 502 - -
Tpr2g6039 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 286 297 IPR016160 GO:0016491
Tpr2g6039 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 258 265 IPR029510 GO:0016491
Tpr2g6039 502 SUPERFAMILY ALDH-like 5 485 IPR016161 GO:0016491
Tpr2g6039 502 CDD ALDH_F10_BADH 27 486 - -
Tpr2g6039 502 Pfam Aldehyde dehydrogenase family 24 484 IPR015590 GO:0016491
Tpr2g6039 502 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6039 Tpr-Chr2 73390250 73394135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6039 1 500 Aldehyde Dehydrogenase Gene Family AT1G74920 75.848 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6039 K00130 - gmx:100170755 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g6039 2 73390250 73394135 Tpr2g6039 2 73390250 73394135 ECH