Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6036 ATGGACATGTTAAGTGTCACTGACATCTTCACTGGCCAAAAACTTTGTGGTTTGATAAAGCAGAGATTAGCAGAGGTTACTCCAAGAGATTCACAAAGATTGGCAGTAAAAAAGGACATTTCCTTAGGTGTTGCATTGGGCTCTGCTACTCAAATTGCAATGATTGTGGTTCCACTATGTGTAATTGTTGCTTGGATAATGGGTGTGAAAATGGACTTGAACTTCAACCTCCTTGAGACAGGTTCTCTTGCTTTGGCAATTATTGTCAGTGCCTTCACTTTACAGATTGCTCTTCTTTCTCGCACAACAACAACGGCAGCCTCCGACGTAGATGGGATAAATGCAATTGTATCATGA 357 0.4118 MDMLSVTDIFTGQKLCGLIKQRLAEVTPRDSQRLAVKKDISLGVALGSATQIAMIVVPLCVIVAWIMGVKMDLNFNLLETGSLALAIIVSAFTLQIALLSRTTTTAASDVDGINAIVS* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6036 118 PANTHER VACUOLAR CATION/PROTON EXCHANGER 36 96 - -
Tpr2g6036 118 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 36 96 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6036 Tpr-Chr2 73343011 73347420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g6036 37 104 Antiporters AT3G51860 72.059 9.44e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6036 K07300 - gmx:100816231 103.99