Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5997 ATGAGCTTTATCGATGACGGCATCGACTTAAACCCTTCCGATTTCGGCTTCATCGATGACGGCATCGACTTAGACCCTTCCGATTTCGGCTCATCAGTCCCCTTAAAAAAAGTCCCAAACGGCGACGTTTTCCAAGCATCACGCGCCGGCGACGTCGACCGTCTCCGTTACCTTCTTGAATGCGGCGTTAACGTCAACGCTCGTGATCAATGGGACTCCGTCGCACTTTACTACGCTTGTCTCGCCGGTCATCTTGATGCCGCTCGTATGCTTCTAGAAAGTGGCGCTATTTGCTCCGAACACACTTTTGACGGTGATAGGTGTCATTATGCTGCTCTTAATTTGAAGGTTCGGAAACTTCTTAAAGCTTTTGAAGCTCGTCCTCCTCCTTTGAATCCTTTGCAGTCTTCTCTTCGTGATACTTTTTATGCTTGTCCTGCTAATTCGCATTCCGGTGGCTTTCAGTTACCTGGTATCTCATCCACTCAAGGGTTCAGTGGCAACTACTTTCCTCCAGATGTGGTTTTTACTGTACAAGGAAGACCCATTGAAGCTCACAGGGTCATATTAAGTGCAAGGTCGCCATTTTTCAAGAAAAAATTTGAAACTGATTGGAAAGAGCGCAGTGAAGTAAGATTTTCACGGGAAAAGTTGTCATATCCTGCACTTTATAGCCTTATACATTTCTTTTATTCAGACAGATTAGAGATTGCTGTGGATGACATGGAGGATCTTGTGAGAATTTGCAAAGTATGCAAATGTGAATCTCTACAGAAAATTCTCGAGAAAGAAGTAGTTCATCAAAAATATGCAGACTATAAAGCTTTGACAGATGTAGACAATTCCCAGAAGCGGTTTATTTTACAGGGTCAATCTCTTCCCGAAGAAGACAGGCTTCCTGCTGCCTTGCACAGAGTCCTTCTGACGGCCCTTTCAAATTCCACTCATGAAAATTGTCAAGATAATGGAATCAATGAATTGGTATTTAGGATGGACGCCATGCAGATGGCTAAACCACTAAATGATCTTTCTGATGTTTGCGTAAGAGTTGATAGAAAAAATTTCCGCTGCCATAAAATTATTCTAGCATCAAGGTCAGAATATTTCAAAGCAAGACTATCACGTATGCAGGATTTCCATGAAGGGAAAGATGAATTATATATTGACTTCCTTCCTTGTCTCGAAGAACATGACATGAGTGTGGAAGCATTTGAGAAAATGATTGAATATATGTACACCGACCGTTTGCAGGAAATAAATCCAGATCAGGCTGAGGAAATGTTTGATATTGCTTCTAGATACTTGATGTTTCCTCTTAAGCGTGCGGTGGCTGATGTTTTAATACCACACTTGGAAGTTGCGACACCTGAAGAACTTTGCTATTGGTTGATGCTAGCAGACATGTACGGTGTTTTGAAGATTCGGGAATTCTGTTTAGACACCATTGCTTGTAATTTTGAAATGTTTGCCGATACTAAAGATTTTAGGGCATTGTTGTTGACTTTGCCTCCACCATCTGGAGACTCATCTCTTCGTACTACTGTCCCAAGCATGCCTGGATCTGCCCTAAATAATGATCAAGGAAATCTTCTTGATGATTTACGTGATAAATGGCTCGAGATTGAAGCTGCTGAGCTTGACGAGAGAGATGAGAGTGCTTTACAATTTGACAAGCGCCTAGAGATGCTTATGCTTGTTGCAGAGCATGAAAAGTCATCAGGTGATGTTGATTCAAATGGTGTTAATGATGTCACACACATGGCGGATTTCTCCCCAGTCACCGCTTTAATTTCAGGTGAACAAAAAGAAGCGTAG 1815 0.4215 MSFIDDGIDLNPSDFGFIDDGIDLDPSDFGSSVPLKKVPNGDVFQASRAGDVDRLRYLLECGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLNPLQSSLRDTFYACPANSHSGGFQLPGISSTQGFSGNYFPPDVVFTVQGRPIEAHRVILSARSPFFKKKFETDWKERSEVRFSREKLSYPALYSLIHFFYSDRLEIAVDDMEDLVRICKVCKCESLQKILEKEVVHQKYADYKALTDVDNSQKRFILQGQSLPEEDRLPAALHRVLLTALSNSTHENCQDNGINELVFRMDAMQMAKPLNDLSDVCVRVDRKNFRCHKIILASRSEYFKARLSRMQDFHEGKDELYIDFLPCLEEHDMSVEAFEKMIEYMYTDRLQEINPDQAEEMFDIASRYLMFPLKRAVADVLIPHLEVATPEELCYWLMLADMYGVLKIREFCLDTIACNFEMFADTKDFRALLLTLPPPSGDSSLRTTVPSMPGSALNNDQGNLLDDLRDKWLEIEAAELDERDESALQFDKRLEMLMLVAEHEKSSGDVDSNGVNDVTHMADFSPVTALISGEQKEA* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5997 604 Gene3D - 7 151 IPR036770 -
Tpr2g5997 604 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 20 567 IPR044515 -
Tpr2g5997 604 SUPERFAMILY POZ domain 169 263 IPR011333 -
Tpr2g5997 604 ProSiteProfiles BTB domain profile. 344 420 IPR000210 GO:0005515
Tpr2g5997 604 CDD BTB_POZ_ZBTB_KLHL-like 343 434 - -
Tpr2g5997 604 ProSiteProfiles BTB domain profile. 172 239 IPR000210 GO:0005515
Tpr2g5997 604 CDD BACK 455 498 - -
Tpr2g5997 604 SUPERFAMILY Ankyrin repeat 45 122 IPR036770 -
Tpr2g5997 604 SMART BTB_4 344 451 IPR000210 GO:0005515
Tpr2g5997 604 SMART BTB_4 172 269 IPR000210 GO:0005515
Tpr2g5997 604 Pfam Ankyrin repeats (many copies) 44 92 IPR002110 GO:0005515
Tpr2g5997 604 SUPERFAMILY POZ domain 340 450 IPR011333 -
Tpr2g5997 604 Pfam BTB/POZ domain 172 268 IPR000210 GO:0005515
Tpr2g5997 604 Pfam BTB/POZ domain 342 448 IPR000210 GO:0005515
Tpr2g5997 604 Gene3D Potassium Channel Kv1.1; Chain A 164 287 IPR011333 -
Tpr2g5997 604 Gene3D Potassium Channel Kv1.1; Chain A 326 483 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr2g5997 BTB 3.4e-17 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5997 K10520 - gmx:100812009 912.909