Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5992 ATGGAAGCAAAGAAAGAGGAGGCACTTAAAGCGATAGCGAATGCTGAGAAAAGATTTGCTCATAGAGACTTTGTTGGAGCAAAAAGTTATGCTTTAAAAGCCAAAACACTGTGTCCTGGATTGGAGGGTATATCTCAATTGGTGACCACTTTTGAAGTTTACATTGCCTCTCAAGTTACCTGCAATGGTGAACTAGATTGGTATTCCATTATGGGTTTAAAACCTTCGACAAATATAGAAGCTGTGAAGAAACGGTACAAGAAGATGGCTGGGTTGCTCCACCCTGATAATAACAAGTGTGTTGGAGCTGATGGGGCATTTCATCTTGTTTCTGAGGCATGGAGTAGGCTGTCTGGTAGTTATGACCTGAAGAGAAATGCACAATCGGGTGCTGGGCATGGACTTCATCACAAGGGTTTGTCTTCGGTTCATGCCTCTGGTGGTAATCAGGATACTTTCTGGACGATCTGTACTTCTTGCAAAGTTCAGTATGAGTATCTGCGCAAGTATATAAATAAGAAACTTTCTTGTAAGAATTGCCGTGGGGTTTTCATTGCTGTTGAAACAGCCCCGGCAAATGGTTCATTCCCGTATTGTCCTTGGTCTTATGGATCTAGCAGTGGCTATGGAAGCCATTCATATGATGGTGTTACATATGTTCCCAATAATGGCGCCTATTTCAATGGTAACGGAGTTGCCGGATACCACTCGGCACACGGGTATGAGTATGCTTCAAATGTTCCATATCAAATTAACTCTGCTGGATATGTCAATCAGAATGGATCAACAACCTTACCTGCTCGTCAGTCCAATGGGCATGCAAAGAGGGGAAGACCAAAAGTTAAATCAGGAGCTGATAGGAAGCATTGCATGACAGAGACAGTGGTCAATATAAACTCAGATGTATCATTCTCCCGGAATGAACCACAGGAGGTAAAGCCGAATAGACCTGAGAAGAAAAGGAAAGTTCTAGGAGCCAGTTTAAGAGATGTCCATGAAGGAAAGGGTTTAAAATGTGCTTCAGAGTCAGGATTGGCTAATGGGAATGGAAGCGTTGGGCATGGCCAGAGGATTTCCAGCACAAGTGAAGTTCCAACTAAACAGTATGCCAAACAGTATTCCATGGCACCAGCTTTTGATGCAAGAAAATTATTGATTGAGAAAGCCAGGACAGAAATAAGAAAAAAACTGGAAGAGATGAAGTTGGCATCTGAAACAGCAGCTGCTCTTAATGAGACAAAAAAATCTCAAGCTGATGTTGGTCAGGTCAAAGGAGACACGCACATTAAAACAGTTCTGAATGTTTCTGATAATCAGTTAGAACATAGGAAAACTGTTCCAGTGACAATTACTGTTCCAGATCCCGACTTTCATGACTTTGACAAAGATAGGTCAGAGCCGTGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGGATGCCCCGCTTGTATTGTCTGATACGTGAGGTTGTGTCTGTCAATCCATTCAAGATTAACATTAGTTACTTGAGTTCAAAAACTGATAGCGAGTTTGGCCAAGTGAACTGGCTTGTTTCAGGTTTCACCAAATCTTGTGGAAATTTCAGGGCCATGACCTCTGATGTTGTTGACCAAGTTAACATTTTTTCTCATGCTCTAAGCAGGGTGAAGGCCGGTCGAGGTGGCTGTGTTCGCATATATCCAAAATGTGGAGAAATCTGGGCTGTTTACAGAAACTGGTCAACAGATTGGAACAGATCTACACCAGATGAAGTAAGGCATCAGTACGATATGGTGGAGGTGCTGGATGATTATTCCGAGGAGCTTGGTCTTTGCATTAGCCCCCTTATTAAGTTGGATGGATTCAAAACCGTGTACAAGAGGAACACAGACAAAAGTGCCATTAGATGGATTCCCAGAAGAGAAATGTTGCGCTTTTCGCATCAAGTGCCTTCGTGGTTGTTGAAGGGGGAGGAGGCAAGCAATTTGCCCGACAAGTGCTGGGACCTTGATCCAGCTGCAACTCCTGACGAGCTCCTTCATGCTGCTATAGAAGCAGCAAATGCTTCTTAG 2064 0.4336 MEAKKEEALKAIANAEKRFAHRDFVGAKSYALKAKTLCPGLEGISQLVTTFEVYIASQVTCNGELDWYSIMGLKPSTNIEAVKKRYKKMAGLLHPDNNKCVGADGAFHLVSEAWSRLSGSYDLKRNAQSGAGHGLHHKGLSSVHASGGNQDTFWTICTSCKVQYEYLRKYINKKLSCKNCRGVFIAVETAPANGSFPYCPWSYGSSSGYGSHSYDGVTYVPNNGAYFNGNGVAGYHSAHGYEYASNVPYQINSAGYVNQNGSTTLPARQSNGHAKRGRPKVKSGADRKHCMTETVVNINSDVSFSRNEPQEVKPNRPEKKRKVLGASLRDVHEGKGLKCASESGLANGNGSVGHGQRISSTSEVPTKQYAKQYSMAPAFDARKLLIEKARTEIRKKLEEMKLASETAAALNETKKSQADVGQVKGDTHIKTVLNVSDNQLEHRKTVPVTITVPDPDFHDFDKDRSEPCFKPKQIWALYDEEDGMPRLYCLIREVVSVNPFKINISYLSSKTDSEFGQVNWLVSGFTKSCGNFRAMTSDVVDQVNIFSHALSRVKAGRGGCVRIYPKCGEIWAVYRNWSTDWNRSTPDEVRHQYDMVEVLDDYSEELGLCISPLIKLDGFKTVYKRNTDKSAIRWIPRREMLRFSHQVPSWLLKGEEASNLPDKCWDLDPAATPDELLHAAIEAANAS* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5992 687 Gene3D DnaJ domain 54 122 IPR036869 -
Tpr2g5992 687 PANTHER BNAC03G44070D PROTEIN 1 679 - -
Tpr2g5992 687 SUPERFAMILY Chaperone J-domain 56 120 IPR036869 -
Tpr2g5992 687 PANTHER BNAC03G44070D PROTEIN 1 679 - -
Tpr2g5992 687 MobiDBLite consensus disorder prediction 265 287 - -
Tpr2g5992 687 Coils Coil 386 413 - -
Tpr2g5992 687 ProSiteProfiles dnaJ domain profile. 66 132 IPR001623 -
Tpr2g5992 687 Pfam DnaJ domain 66 118 IPR001623 -
Tpr2g5992 687 Pfam Domain of unknown function (DUF3444) 449 656 IPR024593 -
Tpr2g5992 687 SMART dnaj_3 65 122 IPR001623 -
Tpr2g5992 687 CDD DnaJ 66 118 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5992 Tpr-Chr2 72282174 72285468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5992 5 280 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.508 1.17e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5992 - - gmx:100792639 1009.98