Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5991 ATGCGTCCACCAATGAAGAGAATCGATTACAATGTAGGAGACAAAGTAGAAGTGTGTTGCAAAGAAGAAGGGTTTGTTGGATCATATTATGAAGCCACAATTGTTTCATGTCTTGATAATGGAAAGTATGTTGTTCGTTACAAGAACCTTCTTAAAGATGACGAGTCTGGACTTCTTACTGAAGCATTATTTCCAAAGGATCTTCGTCCATTACCGCCACGTGTTCGTAATCCTCCTAAGTTCCAACTCAATCAAAAAGTTGATGTTTTTGATAAAGATGGTTGGTGGGTTGGGGAAATTACAAGCGAGAAGATCCGTATGCAAAAGAGTTATTACTATAACGTGTATTTCGACTATACCAATCAAAACATTTACTACCCTTGTGATCAAATAAGGGTTCATCATGAGTTGTCGTTTAGTGGAGAGTGGATCTTGGAAGCTTAA 444 0.3784 MRPPMKRIDYNVGDKVEVCCKEEGFVGSYYEATIVSCLDNGKYVVRYKNLLKDDESGLLTEALFPKDLRPLPPRVRNPPKFQLNQKVDVFDKDGWWVGEITSEKIRMQKSYYYNVYFDYTNQNIYYPCDQIRVHHELSFSGEWILEA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5991 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 145 - -
Tpr2g5991 147 Gene3D - 4 56 - -
Tpr2g5991 147 SUPERFAMILY Chromo domain-like 78 130 IPR016197 -
Tpr2g5991 147 SMART agenet_At_2 79 139 IPR014002 -
Tpr2g5991 147 SMART agenet_At_2 8 76 IPR014002 -
Tpr2g5991 147 Pfam Agenet domain 13 73 IPR008395 -
Tpr2g5991 147 PANTHER - 9 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5991 Tpr-Chr2 72276228 72276678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5991 22 107 PHD Transcription Factor Family AT5G58610 35.135 3.05e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5991 - - mtr:MTR_4g079980 210.305