Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g5968 | ATGTCACTTTCTTCTTTTTCTTCTTTTTCTTCTATACGAGAGTTGTTTTCTCAACAATTTTCAACCAAGATTAGGGTTCTTGTGATTGATCATGATATCAATCTTCTCAATTCTATTGAGAAAGTATGCAGTCAATTCTATTACACAGTCAGGACATGCTCCAATGTTTCGGATGCTTTGAATCTTTTGATGGAAAAAAAGGATAATTTTGATTTGCTACTAATTGAAGCTATAATGCCCAATGTGAATTCATATGAATTTTTGCAATATGTTAGGCAACAAATTGATATTCCTGTTATTATGATGAGTGCGGATGACTCAAGAAGTGTTGTGATGAAGGCTATTGAAGATGGAGCGTGTGATTATTGGATCAAACCTTTGACTGATAATCTAATTATGAACATGTGGCAACATGTTGCAAGAAAAATGTGGAATGAAAATAAAAACCTAAAATTTGGGGTTGAAGTCAGTCTGAAAAAAGGGGAGATATATGATTCAAAATTGCCTTTAATTGATCCAAAAATAGGAGTGATCAACACTAGTGTGGAACAAAAGAGTGTAGAAAAGAATAATGACAAACCTGAATCGTCAACAAAGACACGTGTTAAATGGACACAAGAGTTGAAGAGAAAGTTTGCTAGTGCTATAATGGAACTCAATGCCGATAAGGCACAACCCAATAAAATTCTTGCAAGGATGAATGTGCCTGGGTTGACAAGAGAGCATGTAGCTAGTCACTTACAGAGAGAAATTGAAGAGAGGAGATACAAAGAAACAAAAAAAACAGAACAGAACTGCAGAAACAAAAAGAGAAACCAAGATTTCAAATGGATCTTCAGAATTTGA | 846 | 0.3428 | MSLSSFSSFSSIRELFSQQFSTKIRVLVIDHDINLLNSIEKVCSQFYYTVRTCSNVSDALNLLMEKKDNFDLLLIEAIMPNVNSYEFLQYVRQQIDIPVIMMSADDSRSVVMKAIEDGACDYWIKPLTDNLIMNMWQHVARKMWNENKNLKFGVEVSLKKGEIYDSKLPLIDPKIGVINTSVEQKSVEKNNDKPESSTKTRVKWTQELKRKFASAIMELNADKAQPNKILARMNVPGLTREHVASHLQREIEERRYKETKKTEQNCRNKKRNQDFKWIFRI* | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g5968 | 281 | Gene3D | - | 196 | 261 | - | - | |
Tpr2g5968 | 281 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 199 | 248 | IPR006447 | GO:0003677 | |
Tpr2g5968 | 281 | Pfam | Myb-like DNA-binding domain | 201 | 249 | IPR001005 | - | |
Tpr2g5968 | 281 | SUPERFAMILY | CheY-like | 23 | 148 | IPR011006 | - | |
Tpr2g5968 | 281 | ProSiteProfiles | Response regulatory domain profile. | 25 | 140 | IPR001789 | GO:0000160 | |
Tpr2g5968 | 281 | SMART | REC_2 | 24 | 136 | IPR001789 | GO:0000160 | |
Tpr2g5968 | 281 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR14 | 16 | 257 | - | - | |
Tpr2g5968 | 281 | Pfam | Response regulator receiver domain | 26 | 134 | IPR001789 | GO:0000160 | |
Tpr2g5968 | 281 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 16 | 257 | IPR045279 | GO:0009736 | |
Tpr2g5968 | 281 | SUPERFAMILY | Homeodomain-like | 197 | 249 | IPR009057 | - | |
Tpr2g5968 | 281 | CDD | REC_typeB_ARR-like | 26 | 140 | - | - | |
Tpr2g5968 | 281 | Gene3D | - | 22 | 155 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g5968 | Tpr-Chr2 | 71965779 | 71967133 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g5968 | 17 | 237 | Response Regulator Gene Family | AT4G16110 | 36.752 | 1.28e-41 | 150 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-ARR-B | Tpr2g5968 | Response_reg | 1.8e-15 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g5968 | - | K14491 | cam:101491966 | 228.409 |