Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5959 ATGGCGGTAATGGGACTGTTATTTCCAGCAGTTCTTCATGCTACACAAACAGAATCTGAATATGGGAAATCTCAGTTATCTCTTTCAAGATTTACGAGTTGCATTATGCTTGTGGCGTATGCTTCCTATATAGTGTTTCAAGTGAAGAATCTGAATAATTTACAAGTTCCAGTTGATGAGGACAAGAGTTTCAATGAAGATACATCAAATGATGAAGAAGCTCCTGAGATTTCAATGTGGGAATCAATGATATGGATTTCAATCTTAACAGGAGGTATATCTATCCTGTCAGAATACTTGGTTAACACCATAGAGGGGGCATCAAAAGAGTTTGAAATGCCTGTGTCATTTCTTAGTGTTATTCTTCTTCCAGTAATTGGAAACGCTGCAGAACATGTTGGAGCTGTTATGTTTGCTGTCAAAGACAAACTTGACATATCGCTGGGCGTGGCCGTAGGATCTTCAATACAAATATCAATGTTTGTGATTCCATTTTGTGTGGTTGCTGGATGGATGATCGATTGTCCTATGGACTTGAATTTTCAGCCTTTCGAGACAACTTCACTTTTCATGTCAGTTATCATAGTCGCCTTCATGTTGCAAAATAGAACTTCAAACTACTTCAAAGGGATGGTGCTCATTCTTTGCTATTTGATAGTTTCTGCAAGTTTTTTTGAACACATTGATCCTATGTCAGTTGAAGATAATCCCTCAACTGCTGGTTAG 726 0.3802 MAVMGLLFPAVLHATQTESEYGKSQLSLSRFTSCIMLVAYASYIVFQVKNLNNLQVPVDEDKSFNEDTSNDEEAPEISMWESMIWISILTGGISILSEYLVNTIEGASKEFEMPVSFLSVILLPVIGNAAEHVGAVMFAVKDKLDISLGVAVGSSIQISMFVIPFCVVAGWMIDCPMDLNFQPFETTSLFMSVIIVAFMLQNRTSNYFKGMVLILCYLIVSASFFEHIDPMSVEDNPSTAG* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5959 241 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 237 IPR004713 GO:0006812|GO:0008324|GO:0016021
Tpr2g5959 241 Gene3D - 64 225 IPR044880 -
Tpr2g5959 241 PANTHER VACUOLAR CATION/PROTON EXCHANGER 1 237 - -
Tpr2g5959 241 Pfam Sodium/calcium exchanger protein 84 220 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5959 Tpr-Chr2 71834973 71837179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5959 1 230 Antiporters AT1G55730 66.522 3.37e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5959 K07300 - jre:109000743 340.887