Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5951 ATGGTAGAATATGATGAATATGTAGATGTTGATTCGAATGAAGTTAGTTCAACTGATAGTCATACATATGATGATGAGGATTCCAGCTATTCGGTATCTAGTGGGCATGATAGGTCAGATGATGGCGATGATACTGGTGACCACGATGATGATGATGATGGTGATGATGATGATGACAATGACCATGATTTTGATGATGAAACATCTGTAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTAATAAAATTCGTGCTATGGATTTTGGTAGTATTGAAGAAGCTTATGAATTTTATTATCAATACAGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAGAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCACTAGACAAGGTTTAAGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCACCAACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAGGGTAGATATGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCAGTTTATCGTAAAATTAGTGAAGCAGATAGAGCTCAGGTTGATGGTATACAGTCACGTGGAATTAGAACTTGTCATATTATAGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTACAATTTTTTTGATAAAAAAATGTGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTACGCTGAATATGCTGCTGACAGTAGTAATGGACGGATGAAGTCTCTTTTTTGGGCTAATGGGACCAATGAAACCACGGAGACATATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCTAAAAGCTGTGGTGACAGATGTAGATGGGGCTATGAGGGAGGCTATAAAAGAGGTTTTCCCCGATTCGACCCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTTTGAAGGGATTTAAAAAAGCCATCTTCTCAAAATTTTCAAAGGATGATTTTGAAGAGTATTGGTCAGAGATGATTAAAGAAAATGGAGTTGAATGA 1209 0.3763 MVEYDEYVDVDSNEVSSTDSHTYDDEDSSYSVSSGHDRSDDGDDTGDHDDDDDGDDDDDNDHDFDDETSVGERAVRINSMTANKIRAMDFGSIEEAYEFYYQYSKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCTRQGLRDKRHISRLDRKREHQRLTRTKCTARFRVTYKADKGRYVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGIQSRGIRTCHIIGYMVAQKGGYGGVGFTKKDLYNFFDKKMCDIVKDGDVAASLHYLNAKSATDPMLYAEYAADSSNGRMKSLFWANGTNETTETYKWVLNCFLECMENKRLKAVVTDVDGAMREAIKEVFPDSTHRLCAWHLNKNAGENVKNSGFLKGFKKAIFSKFSKDDFEEYWSEMIKENGVE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5951 402 MobiDBLite consensus disorder prediction 44 65 - -
Tpr2g5951 402 Pfam MULE transposase domain 304 361 IPR018289 -
Tpr2g5951 402 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 302 IPR031052 GO:0006355
Tpr2g5951 402 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 305 396 IPR031052 GO:0006355
Tpr2g5951 402 Pfam FAR1 DNA-binding domain 98 192 IPR004330 -
Tpr2g5951 402 MobiDBLite consensus disorder prediction 1 71 - -
Tpr2g5951 402 MobiDBLite consensus disorder prediction 18 43 - -
Tpr2g5951 402 PANTHER OS02G0262500 PROTEIN 305 396 - -
Tpr2g5951 402 PANTHER OS02G0262500 PROTEIN 83 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5951 Tpr-Chr2 71730492 71731844 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g5951 FAR1 1.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5951 - - ccaj:109792835 379.022