Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5945 ATGAACATATTAGATGCTTTGTTAGGAACAACCAATGTAGCATTCTTCTATATGATTTTGATGTGGGTTTTATTCAATAGTTTGAGACTAAGCCAACGTAACAATAATTTACATTTTAAACACAAACCAACCTTTTTCGCTTCAATCACTGTCTTGTTCAATGGTGTTATGTCTGTTTTGAACGTAGCTTCTGTTTTCTATGATTACAGTTACACCACTAATGGAGTCATAGGATATAACTCTGTTTCATTGTCTTTGACTTGGGTTTTAGCAACATTGGTTTCATACTATTCAATGAAGAAAATACTTGGGGAGAGTAAAAGGTTTCCTCTTGTTCTAATTCTTTGGTGGGTCTTCGCTTTTATCATTGATATCATCTCACTGTCATTAAAACTAGTAAAAATATCAGAATCCATGAATTTAGTTGATGTAGTTTCTTTGCCTGTGTTGTTACTTCTATGTATCAATGCAGTTCCTAATGTGTGTACAAGGGAACAAAGTGAAATAGAACAAAGGTTACTTGAAGAGGAGTTTGAATCTTCCACTTTGGGAGGAGAAAATGATAAAGAGGCTTTTACAAGAGCTAGTATTTGGAGCCTCCTCACATTTACATGGTTGAATCCCATTTTTGAAACTGGTCGAGTTCAGAAGCTTCGACATGTTCATGTTCCTTATATTCCTCACTGTGAAACTGCTGCTATTGCTTCTTCTATGTTGGAAGAATCCATTCATAAACAGAAAGTTAAAGGTGGATCCTTGGCAAAAGCTATTATCCTCCCTATTTGGAAATCCTTGGCCTTCAATGCAGTTTTAGCAGGTGTTAATACTATTGCATCCTATATTGGTCCCTTGTTGATATCAAACTTTGTAAGTTTTTTATTATCCAACAATGATAATTCAAGCAACCAATATGGATTGATTATTGCCACAATTCTCTTCCTCTCAAAAACGGTGGAGTCAGTGACTCAGAGACAATGGTACTTCGGTGCTCAAAGAATCGGAATTCGAGTCCGTGCAGGTCTCACATCTCAAGTTTATAGCAAGTCTCTAATGGTCAATTGTGGTGGACCAACAGATGGGAACGTCACGAATTTGATTAACGTGGATATCGAAAGAGTTGGAGACTTTTTCAATTACATTCATGGACTTTGGCTGATTCCACTTCAGACAATTTTAGCCTTGGCCATCTTGTGCATAAATCTGGGTTGGATACCTTCCCTTGCTGCCTTTTTTGTCACAACTTTGGTCATGGTGTGTAACACACCTTTGGCAACCATGCAAAAAGGCTTCAACTCCAAGATTATGGATGCTACAGATGCAAGAATGAAAATGACATCAGAGACAATGAAGAACATGCGAATTTTGAAGTTGCACTCATGGGAGTTAACATTTATGCAAAAACTCCTCCAACTTAGGGACACTGAAATGAACTGGGTGCTGAAATACTTCCATGCAAGTTCAGCAGTAGCCACTCTTTTCTGGACAACCCCGACTTTGGTTTCTGTTATCACATTTGGGGCATGTATATTGGTGAAGACTGAACTAACCGCACCAACAGTCCTCTCAGCTCTTGCAACATTCCGCATTCTACAAGAACCAATTTACAATATGCCTGAGCTTATATCCATGATTACTCAAACCAAATTATCAGTTCATCGAATCCACAAGTTAATACAAGTAGAAGATCAAAATCAATCCAGTAATAGGCATGCCTTCGAATCTTCAACAATTTCTATTGAAATTAAGCCAGCAGGATATGCATGGGAAGCTAATGATCACACAACAACCAAGAGATCAACAATTACAATTACAATTACAATTACAAAACCATTTATGATAAATAAAGGTCAAAAGGTAGCAGTTTGTGGATCAGTAGGGTCCGGAAAATCAAGTTTGCTTCTCAGTATGCTTGGTGAGATTCCATTGGTTTCTGGGGAAGCAGCCCAAGTGTATGGAACCAGAAGCTATGTGCCTCAGAGTCCATGGATCCAATCAGGAACTGTGAGAGAAAACATACTCTTTGGAAAGAAAATGGATAAATTCTTGTATGAAAATGTCCTGGATGGTTGTGCATTGCAACAGGATATCAGAATATGGAGTCCATGCGGAGATTTGACCGATGTGGAGGAGAGGGGCATCAACTTAAGTGGAGGGCAGAAACAGCGAATTCAACTGGCAAGGGCGGTTTACAACGACTCAGATATTTATTTCCTTGACGATCCTTTTAGTGCTGTTGATGCTCATACCGGAAGTCATTTGTTTAAGGAATGTCTTCTGAAACTGTTGTCTGATAAAACAGTTGTTTATGCCACACATCAAATGGAATTCTTGGAAGCCGCGGATGTAATTTTGGTTATGAAAGACGGACAAATAGTAGAGTCGGGAAGCTATAGAGATCTCATAGCATGTCCTAATAGCAAACTTGTCCAACTAATGATGGCTCATAACGAAACATTAAAACAAATTCCATCCCAAGAAGACAATGATTCTGTTAGCTGCGGCAGCAGACTCAACCCAAAAATTCTAATTAAAATTCCTGAAGAGAATATTCAGAAGATTACCATGGATGGGAAGAAAACCAGAGAAGAGGAAGCAATGAATGGTCGAGTAAAATGGAGTGTTTACTCAACCTTTGTCACATTGGCTTACAAAGGTGCACTAGTTCCGATTATTCTCCTCTGTCAAGTACTCTTTCAAGCTATGCAGATGGGCAGCAGCTATTGGATATCTTGGGCTACAGAACAAAGGGGTAGGGTCAACAATGGACGGCTTATAGGAATATTTGCCCTTCTGTCCGGTGGGAGCTCCATCTTCATGCTTGGAAGGACTGTTTTAATGACAATAGTTTCGACCGAGACAGCTAGACACCTTTATCATGGAATGACCAAATCAGTTTTCAGGGCACCTATTTCCTTTTTTGATAACACACCTTCAAGCCGAATTCTAAGTAGGTCATCTACAGATCAAACAAGGGCAGATACTGATATTCCATACAGATTAGCTGGACTAGTCTTTGCACTTATCCAGTTATTTTGTGTCATTGTCTTAATGTCTCAGGCCGCATGGCAAGTCCTTCTTCTCTTTTTTGTGGTTTTTTCTATCTCCATCTGGTATCAGGCTTATTACACAACTACAGCCAGGGAATTGGCCAGGATGGTAGGGATTCAAAAGACACCAATCTTGCATCACTTCACTGAATCAATTGCTGGAGCTACCACAATCCGGTGTTTCAATCAAGAGAAAATATTCTTGACCAAGGCTATGTCTTTAATTGATGATTATTCTCGTGTAGCCTTTCACAACTGTGCCACCATGGAATGGTTGTCAGTCAGAATTAATTTTCTCTTTAATTTGGTTTTCTATTTTGTTCTCGTCATCTTGGTTTCTTTGCCAAAGTCTTCCACCAATCCCAGTCTGGCAGGTCTTATAGCTACTTATGGTTTGAGCCTGAATGTGCTTCAAGCTTGGGTGATATGGAACCTTTGTAACGTAGAGAATAAGATGATATCAATAGAGAGAATATTACAATTTTCTAATATACCATCTGAAGCACCAATAGTTATTGAAGATTGTAGGCCTGCACCAGAGTGGCCTAGTGAAGGAAAAATCGAACTCCACAACCTACATATACAGTATAATCCTGCTGCCCCCATGGTTCTCAAAGGTGTCACTTGTGTGTTCCAAGGACATAACAAAATTGGAATAGTAGGCAGGACTGGGAGTGGAAAATCAACTCTGGTGCATGCTCTCTTTCGGGTGGTGGAGCCTATAGAAGGACGCATTATGATTGATGGTTTAAATATTTCCAAGATTGGTCTGCATGACTTAAGGTCCAGACTTGGAATAATTCCTCAAGAGCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGACCCTTTGGAAGAACAAACAGATGAACAACTTTGGGAGGTTCTCCGTAAGTGCCATCTTGCTGAAATAGTTAACCAAGATCCAAGGCTTCTTGATGCACCAGTGGCTGAAAATGGAGAAAATTGGAGCGTTGGACAGCGACAACTAGTTTGCCTTGCTAGATTATTGCTGAAGAAAAGAAGAATTTTAGTCCTAGACGAGGCAACCGCATCCATAGACACTGCAACTGATAGTTTAATTCAGAAAACTATTAGGGAAGAAACGAGTGGATGCACCGTCATTACAGTAGCACACAGAATTCCAACCGTCATTGATAATGATATGGTTTTAGTCCTCAATGAAGGTAGAATTTTGGAGTACGATAACCCAGCTCGTTTGTTGCGGGACCAATCTTCTTCGTTCTCAAAGTTGGTGTCAGAATTTTCAAGGAGATCATCCCAATTCCAAAGTTAA 4347 0.3961 MNILDALLGTTNVAFFYMILMWVLFNSLRLSQRNNNLHFKHKPTFFASITVLFNGVMSVLNVASVFYDYSYTTNGVIGYNSVSLSLTWVLATLVSYYSMKKILGESKRFPLVLILWWVFAFIIDIISLSLKLVKISESMNLVDVVSLPVLLLLCINAVPNVCTREQSEIEQRLLEEEFESSTLGGENDKEAFTRASIWSLLTFTWLNPIFETGRVQKLRHVHVPYIPHCETAAIASSMLEESIHKQKVKGGSLAKAIILPIWKSLAFNAVLAGVNTIASYIGPLLISNFVSFLLSNNDNSSNQYGLIIATILFLSKTVESVTQRQWYFGAQRIGIRVRAGLTSQVYSKSLMVNCGGPTDGNVTNLINVDIERVGDFFNYIHGLWLIPLQTILALAILCINLGWIPSLAAFFVTTLVMVCNTPLATMQKGFNSKIMDATDARMKMTSETMKNMRILKLHSWELTFMQKLLQLRDTEMNWVLKYFHASSAVATLFWTTPTLVSVITFGACILVKTELTAPTVLSALATFRILQEPIYNMPELISMITQTKLSVHRIHKLIQVEDQNQSSNRHAFESSTISIEIKPAGYAWEANDHTTTKRSTITITITITKPFMINKGQKVAVCGSVGSGKSSLLLSMLGEIPLVSGEAAQVYGTRSYVPQSPWIQSGTVRENILFGKKMDKFLYENVLDGCALQQDIRIWSPCGDLTDVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHLFKECLLKLLSDKTVVYATHQMEFLEAADVILVMKDGQIVESGSYRDLIACPNSKLVQLMMAHNETLKQIPSQEDNDSVSCGSRLNPKILIKIPEENIQKITMDGKKTREEEAMNGRVKWSVYSTFVTLAYKGALVPIILLCQVLFQAMQMGSSYWISWATEQRGRVNNGRLIGIFALLSGGSSIFMLGRTVLMTIVSTETARHLYHGMTKSVFRAPISFFDNTPSSRILSRSSTDQTRADTDIPYRLAGLVFALIQLFCVIVLMSQAAWQVLLLFFVVFSISIWYQAYYTTTARELARMVGIQKTPILHHFTESIAGATTIRCFNQEKIFLTKAMSLIDDYSRVAFHNCATMEWLSVRINFLFNLVFYFVLVILVSLPKSSTNPSLAGLIATYGLSLNVLQAWVIWNLCNVENKMISIERILQFSNIPSEAPIVIEDCRPAPEWPSEGKIELHNLHIQYNPAAPMVLKGVTCVFQGHNKIGIVGRTGSGKSTLVHALFRVVEPIEGRIMIDGLNISKIGLHDLRSRLGIIPQEPTLFLGTVRTNLDPLEEQTDEQLWEVLRKCHLAEIVNQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDSLIQKTIREETSGCTVITVAHRIPTVIDNDMVLVLNEGRILEYDNPARLLRDQSSSFSKLVSEFSRRSSQFQS* 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5945 1448 CDD ABCC_MRP_domain2 1201 1421 - -
Tpr2g5945 1448 PANTHER OS01G0902100 PROTEIN 110 1445 - -
Tpr2g5945 1448 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 110 1445 - -
Tpr2g5945 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 803 IPR027417 -
Tpr2g5945 1448 Pfam ABC transporter 1220 1368 IPR003439 GO:0005524
Tpr2g5945 1448 Pfam ABC transporter 611 742 IPR003439 GO:0005524
Tpr2g5945 1448 Pfam ABC transporter transmembrane region 892 1134 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g5945 1448 Pfam ABC transporter transmembrane region 268 533 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g5945 1448 Gene3D ABC transporter type 1, transmembrane domain 851 1184 IPR036640 GO:0005524|GO:0016021
Tpr2g5945 1448 Gene3D ABC transporter type 1, transmembrane domain 244 559 IPR036640 GO:0005524|GO:0016021
Tpr2g5945 1448 SUPERFAMILY ABC transporter transmembrane region 890 1183 IPR036640 GO:0005524|GO:0016021
Tpr2g5945 1448 CDD ABC_6TM_ABCC_D2 888 1178 IPR044726 GO:0140359
Tpr2g5945 1448 ProSitePatterns ABC transporters family signature. 715 729 IPR017871 GO:0005524
Tpr2g5945 1448 SUPERFAMILY ABC transporter transmembrane region 257 561 IPR036640 GO:0005524|GO:0016021
Tpr2g5945 1448 CDD ABC_6TM_ABCC_D1 267 554 IPR044746 GO:0140359
Tpr2g5945 1448 Gene3D - 560 833 IPR027417 -
Tpr2g5945 1448 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 890 1166 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g5945 1448 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 269 546 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g5945 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 590 813 IPR003439 GO:0005524
Tpr2g5945 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1203 1437 IPR003439 GO:0005524
Tpr2g5945 1448 CDD ABCC_MRP_domain1 611 790 - -
Tpr2g5945 1448 Gene3D - 1186 1438 IPR027417 -
Tpr2g5945 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1195 1428 IPR027417 -
Tpr2g5945 1448 SMART AAA_5 1229 1422 IPR003593 -
Tpr2g5945 1448 SMART AAA_5 615 790 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5945 Tpr-Chr2 71569447 71595670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5945 613 818 Calmodulin-binding Proteins AT2G36910 30.222 2.10e-18 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5945 - - gmx:100809063 1962.96