LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g5944	ATGTCTGCGGATGGTTTGTCGGGTTTCGATGTCGAAGTAAACATGAAAGACTTGACAGCAGAAGAAATACAAAATATGGAATTTGAATCTATAGAAAAAGCAGAGGAATTTTATGTAGAATATGCAAGGTGTCTTGGGTTTTCCGCTAGAAAAGATGTAAGGCGAGTCACCGCTGAAGGTGTTGTACATACACGTCAGATGGTTTGTTCTAGGCAGGGTGAGAGAGCTAAAAAAAATATTGAGCGCACTGAACGTTCGAGACAACCCAGGGGATTGTCACGAACATCTTGTGTAGCTATGATTCGATTTCACCTTAATAACAGTAGTGGTACTTATGGTGTTGTCTGCTTTATGCCCGTTCACAACCATCCTTTAACTCCATCCACACATGTTCACCTGATCCCCAAGTATCGTGGATTGAATGAAGCCGATAAGAATTTCGTAGATGGGTTGCATTCGTACGGGGTTAGATCTTGTCATATTCTGGGATATTTGATGGGTCAAAAAGGTGGTCATGCAGGGCTTGGTTTTTGCAAAAAAGACCTTTATAACTACATCACCAGGAGTGGGAAGGCAAAAATGGAGGATGTTGGCGACGCGTATTCTGCTTTGTGTGATATCCAGACAAGAACAGAAAATGACCACCTTTTTTATTGTAAGTTTACACTCGATGATATGGGGCATCTAAATAATTTGTTTTGGTGCGACGGAGCTAGTCGCGTTGACTACAGCTGTTTCGGGGAAGTGATTGCCTTCGATGCGACTTATAAGAAGAACAAATACGACAGGCCACTCGTTGTTTTTTGTGGTTACAATCACCACAAGGAAACTACAGTTTTTGCCTGTGCCTTAATTGTCAACGAAAAAACTGAGACATACAAGTGA	885	0.4169	MSADGLSGFDVEVNMKDLTAEEIQNMEFESIEKAEEFYVEYARCLGFSARKDVRRVTAEGVVHTRQMVCSRQGERAKKNIERTERSRQPRGLSRTSCVAMIRFHLNNSSGTYGVVCFMPVHNHPLTPSTHVHLIPKYRGLNEADKNFVDGLHSYGVRSCHILGYLMGQKGGHAGLGFCKKDLYNYITRSGKAKMEDVGDAYSALCDIQTRTENDHLFYCKFTLDDMGHLNNLFWCDGASRVDYSCFGEVIAFDATYKKNKYDRPLVVFCGYNHHKETTVFACALIVNEKTETYK*	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g5944	294	PANTHER	OS02G0262500 PROTEIN	22	293	-	-
	Tpr2g5944	294	Pfam	FAR1 DNA-binding domain	36	126	IPR004330	-
	Tpr2g5944	294	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	22	293	IPR031052	GO:0006355
	Tpr2g5944	294	MobiDBLite	consensus disorder prediction	72	89	-	-
	Tpr2g5944	294	Pfam	MULE transposase domain	249	294	IPR018289	-
	Tpr2g5944	294	MobiDBLite	consensus disorder prediction	72	91	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g5944	Tpr-Chr2	71564059	71564943	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Tpr2g5944		FAR1	9.1e-19	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g5944	-		-	ccaj:109792835	299.671