Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5942 ATGGGGTTCAAAAAAAGTATTAATCAATTTGTTTTTACTATTTTGATCCTATTAATAATTCCGACTCTAATCGCCGCTGAATGCACATGTGATAAGGAAGATGAAGATAGAAACAAAGCCAAAGCTCTATTTTACAAAATAGCTGCTTTGATATCGATACTAATTGCAAGTGCAATTGGTGTTTTCATCCCACTTCTTGGTAAAGTGATACCGGCATTAAGCCCTGAAAAAAATATATTCTTTGTCATCAAAGCCTTTGCGGCCGGGGTGATATTATCCACCGGTTTCATTCATGTTCTACCTGATGCTTTTGAGAATCTTACTTCTCCTTGTTTAAATGAACATCCTTGGGGTGATTTTCCGTTCACCGGTTTTGTGGCTATGTGTACCGCTATGGGGACTCTTATGGTTGAAACTTATGCCACTGCTTATTTTCAGAATCAATATTCTAAAAAGGCTCCGGCACAGGGTGAGAGTCATGTGGCGGTCTCGGACGTGGAAAAGGAAGCCGGAGAGCATCATGGACATGTGAATGTTCATACTCATGCATCACATGGTCATGCACATGGCCGCGTTTCTTTGGATCAGAACTCGGATCAGTCGTTAGAACTTCTTCGTCATAGGGTTATATCAGAGGTGTTGGAGTTGGGAATTATTGTTCACTCTATTATAATAGGAATTTCTTTAGGTGCTTGTGAGACTCCAAAAACCATAAGGCCACTAGTAGCTGCATTGACTTTTCATCAATTTTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGGCTAATTTCAAGAATCTATCAATTACACTAAGGGGATTATTCTTTGCTTTGACAACTCCAGCTGGGATTGGAATTGGTATAGCGATCAGTAGTGTCTATGATGAGAACAGTTCAACTGCCCTTATTGTTGAAGGAATCTTCAATGCAGCTTCAGCTGGGATCTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGACTTAGATTAGGATGCAATCTATCTCTTCTACTAGGAGCTGGTTGTATGTCTCTTTTGGCCAAATGGGCTTAG 1092 0.3984 MGFKKSINQFVFTILILLIIPTLIAAECTCDKEDEDRNKAKALFYKIAALISILIASAIGVFIPLLGKVIPALSPEKNIFFVIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVETYATAYFQNQYSKKAPAQGESHVAVSDVEKEAGEHHGHVNVHTHASHGHAHGRVSLDQNSDQSLELLRHRVISEVLELGIIVHSIIIGISLGACETPKTIRPLVAALTFHQFFEGMGLGSCITQANFKNLSITLRGLFFALTTPAGIGIGIAISSVYDENSSTALIVEGIFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGAGCMSLLAKWA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5942 363 PANTHER ZINC/IRON TRANSPORTER 17 363 - -
Tpr2g5942 363 Pfam ZIP Zinc transporter 45 360 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tpr2g5942 363 TIGRFAM zip: ZIP zinc/iron transport family 29 363 IPR004698 GO:0005385|GO:0016021|GO:0071577
Tpr2g5942 363 PANTHER ZINC TRANSPORTER 1 17 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5942 Tpr-Chr2 71527771 71529753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5942 11 363 Inorganic Solute Cotransporters AT3G12750 52.809 1.61e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5942 K14709 - gmx:547695 519.235