Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5941 ATGGGATTTAAAATTAACATCAAAGAATTTGTTTTGTCTATTTTGATCTTCCTCATAATCCCAACTCTAATAGCCGCAGAATGTACGTGCGATGAAGAAGATGAAGATAGAGACAAAAGCAAAGCCCTACGTTACAAAATAGCGGCTTTAGTATCGATACTAGTTGCAAGTGCAATTGGTGTTTGCATTCCACTTCTTGGAAAAGTGATACCCGCCTTAAGCCCCGAAAAAGATATATTTTTTGTCATCAAAGCCTTTGCTGCCGGTGTGATATTGTCCACCGGTTTCATTCATGTTCTTCCTGATGCTTTTGAGAATCTTACTTCTCCTTGTTTAAATGAACATCCTTGGGGTGATTTTCCGTTCACCGGTTTTGTAGCTATGTGCACTGCTATGGGGACTCTTATGGTGGATACTTATGCTACTGCTTATTTTCAGAACCATTATACTAAAAAAGCACCAACACAAGTTGAGAGTCATGATCATGAGGCAACCTCAGATGTGGAGCATGAAGGACATGTGCATGTTCATACTCATGCATCACATGGTCATGCACATGGTCCTGTTTCTTCGCATCCATCATCAGAACTTCTTCGTCATAGAGTTATATCACAGGTATTGGAGTTGGGAATTATTGTTCACTCAGTTATAATAGGAATTTCTGTGGGTGCTTCAGAGAGTCCTAAAACAATAAGACCACTTGTAGCTGCGTTGACTTTTCATCAGTTTTTTGAAGGCATGGGACTTGGAAGTTGTATAACCCAGGCTAATTTCAAGAGTCTATCAATTACAATCATGGGATTGTTCTTTGCTTTGACAACTCCGGTAGGAATTGGAATTGGTTTAGGGATCAGCAGTGTTTATGATGAGAATAGTCCAACCGCTCTTATTGTTGAAGGAGTCTTCAATGCAGCTTCAGCTGGAATATTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGGCTTAGATTAGGATGCAATCTATCTCTTTTACTAGGTGCTGGTTGTATGTCTCTTTTGGCCAAATGGGCTTAG 1071 0.3959 MGFKINIKEFVLSILIFLIIPTLIAAECTCDEEDEDRDKSKALRYKIAALVSILVASAIGVCIPLLGKVIPALSPEKDIFFVIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYTKKAPTQVESHDHEATSDVEHEGHVHVHTHASHGHAHGPVSSHPSSELLRHRVISQVLELGIIVHSVIIGISVGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSLSITIMGLFFALTTPVGIGIGLGISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGAGCMSLLAKWA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5941 356 PANTHER ZINC/IRON TRANSPORTER 17 356 - -
Tpr2g5941 356 TIGRFAM zip: ZIP zinc/iron transport family 28 356 IPR004698 GO:0005385|GO:0016021|GO:0071577
Tpr2g5941 356 Pfam ZIP Zinc transporter 45 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tpr2g5941 356 PANTHER ZINC TRANSPORTER 1 17 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5941 Tpr-Chr2 71519514 71524206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5941 14 356 Inorganic Solute Cotransporters AT3G12750 56.534 1.08e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5941 K14709 - gmx:547695 524.628