Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5933 ATGGAGAAAAGATTTACTTCTTCTGATCAAGAGGAGAATGATCACATAAATGAAGGTTTTGATGATATGCAAGAAGCAAATATTGCCCACGAAGATGAAGAACCTAAGGTTGGGATGACATTTATTTCCGAAGATGAAGTTACCACATATTACAAGAATTATGCTCGATGTATGGGTTTTGGAATTAGTAAAATCAATTCAAAAAATGCAGATGATGGAAAAAAATACTTTACTCTAGCATGTAGTCGGGCAAGAAAGCATACGAGCAATTCAAAAAATCTTTTGAAGCCAAATCCCACCACAAGAACACAATGTAAGGCTAGAGTAAGTGTGGCTGTGTCTTTAGATGGAACAATTACGGTTTCAAGAGTTGCACTTGAGCATAATCATGAATTAAGCCCAACCAAGTCAAGATATTTTAGATGCAACAAAAATTTGGACCCTCATATCAAAAGGAGACTGGAGCTTAATGATAAAGCTGGAATTAATGTAAGCAGGAATTTTCGGTCCATGGTTGTGGAAGCGAATGGATATGATAATCTTACCTTTGGGGAAAAAGATTGCAGAAATTATATCGACAAAGTAAGGCGGCTTCGACTTGGGACAGGTGATGCTGATGCCATTCAAAACTATTTCGATAGAATGCAAAGAGAAAACAATCAATTTTATTATGTTATGGATGTGGATGACAAAAGTCACTTACGAAATGTATTCTGGGCAGATGCCAGATCTAGGACTGCTTATGAGTATTTTGGTGAAGTCATAACTTTTGACACTACTTATTTAACGAATAAATACGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCATGGCCAATCAGTTTTGTTAGGTTGCGCTCTATTGTCGAATGAGGATACTAAAACCTTTTCTTGGCTGTTCACAACTTGGTTGAAGTGTATGCATGGACGTGCACCAAATGCTATAATTACTGACCAAGATAGAGCAATGAAGAATGCAATTGAGGTCGTCTTTCCGAAAGCTCGTCATCGGTGGTGCTTGTGGCATATAATGAAAAAGGTTCCAGAAAAATTGGGTAGACTCTCTGATTATGAGTCTATCAAAACACTTTTGCATGATGCTGTATATGATTCGTCGAGCATAAGTGATTTCATGGAGAAGTGGGGGAATATGATTGCATGTTATGAGCTACATGATAACGAATGGTTGAAAGGGCTGTTTGAAGAACGACATCGTTGGGTTCCTGTGTATGTTAGAGACACATTTTGGGCTGGAATGTCAACTACTCAAAGAAGTGAAAGTATGAATTCATTCTTTGACGGGTATGTGAACTCAAAGACAACATTAAAGCAATTTGTTGAGCAATATGACAATGCACTGAAAGATAAAATTGAAAAAGAAAGCAAGGCTGATTTTAATTCATTTAATACAACAATTGCTTGTATAAGTCGTTTTGGCTTTGAGTCTCAATTCCAAAAGACATTTACCAATGAAAAATTCAAAGAAATTCAAACAGAAATTTCTTCTTTGATGTACTGCAATGCTTTCTTTGAGAGAAATGATGGTTTGAATTCAATATTTTGGGTTATAGAGAGTAAAAGAGTATATGATAGAAATAAAGACATAAAGTTCAAGGTATTTTTCAACGAGAAAGACTTCGAAATACAATGTGCATGTTGTCTATTTGAGTTTAAAGGAATTTTATGCAGACACATCCTTTGTGTTCTTCAGCTCACAGGTAAAACAGAGTTGGTGCCGTCTTGTTATATTTTGTCAAGGTGGAGGAAGGATATTAAGCGAAGACACACACTTATTAAATGTGGTTTTGATCATTTAGCTGGAAATATTGAATTGCAACGTGTTAGTAAAGCTTGTGATGCCTTTTACGATGTTGCTTATATGGGGATACATACTGAAGATGATTTATTGAAAGTGATGAATTGGATCAAGGATTTGAAAATTGAATTAACTTGTAAACAAAGCTCTCCTGTGATTATAGAAGAAGAGAGATTAGTTCAAGATCATGCGACTAAAATTCTTGATCCTATAGTATCACAAAAAAAAGGACGACCTCGCGAAAAAAGGAAGACTTCTAAAGTTGATCAAATTGTGAAGAAGAAGCTTGCAAAAAAGAAGACTAAAAATAGCAGTAAAAAGAGTAACAGTGGTCAAACACAAGAAGAGAGGTTTCTATCAGTTCAAGAAACTGAAAATGCAGGGTTTTCTACATCTCAAACCATTGATGACATTGACACACAAGAGAGCATTCAAGTAAACTTAGCTCCCTTCAATCCAAATAAAAAATATTTTGTTGAAGTAAATCAGGTTCCATATTATACTCAATCTCAAATCATAAATCATAATCTTAGCTATGCAGAACTTTTAAAGGCACAACACCATATGAATGATAAACCATCATCATCAGGACATGAATGA 2421 0.3519 MEKRFTSSDQEENDHINEGFDDMQEANIAHEDEEPKVGMTFISEDEVTTYYKNYARCMGFGISKINSKNADDGKKYFTLACSRARKHTSNSKNLLKPNPTTRTQCKARVSVAVSLDGTITVSRVALEHNHELSPTKSRYFRCNKNLDPHIKRRLELNDKAGINVSRNFRSMVVEANGYDNLTFGEKDCRNYIDKVRRLRLGTGDADAIQNYFDRMQRENNQFYYVMDVDDKSHLRNVFWADARSRTAYEYFGEVITFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTKTFSWLFTTWLKCMHGRAPNAIITDQDRAMKNAIEVVFPKARHRWCLWHIMKKVPEKLGRLSDYESIKTLLHDAVYDSSSISDFMEKWGNMIACYELHDNEWLKGLFEERHRWVPVYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALKDKIEKESKADFNSFNTTIACISRFGFESQFQKTFTNEKFKEIQTEISSLMYCNAFFERNDGLNSIFWVIESKRVYDRNKDIKFKVFFNEKDFEIQCACCLFEFKGILCRHILCVLQLTGKTELVPSCYILSRWRKDIKRRHTLIKCGFDHLAGNIELQRVSKACDAFYDVAYMGIHTEDDLLKVMNWIKDLKIELTCKQSSPVIIEEERLVQDHATKILDPIVSQKKGRPREKRKTSKVDQIVKKKLAKKKTKNSSKKSNSGQTQEERFLSVQETENAGFSTSQTIDDIDTQESIQVNLAPFNPNKKYFVEVNQVPYYTQSQIINHNLSYAELLKAQHHMNDKPSSSGHE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5933 806 PANTHER OS03G0843700 PROTEIN 9 616 - -
Tpr2g5933 806 SMART 26again6 550 577 IPR006564 GO:0008270
Tpr2g5933 806 Pfam FAR1 DNA-binding domain 49 133 IPR004330 -
Tpr2g5933 806 ProSiteProfiles Zinc finger SWIM-type profile. 539 575 IPR007527 GO:0008270
Tpr2g5933 806 Pfam MULE transposase domain 254 348 IPR018289 -
Tpr2g5933 806 Pfam SWIM zinc finger 541 572 IPR007527 GO:0008270
Tpr2g5933 806 MobiDBLite consensus disorder prediction 713 743 - -
Tpr2g5933 806 MobiDBLite consensus disorder prediction 677 743 - -
Tpr2g5933 806 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 616 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5933 Tpr-Chr2 71368143 71372355 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g5933 MULE 7.7e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5933 - - cam:101506732 1057.74