Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5920 ATGAAGAGAAATTTTTGTTTGGAGTCCCATAAATCAATGAACGAGGAGTTGAACGTAAATCATCAATTTGTAGTCAATATTCCTCACCACAAGTTTGAAGAAAGGGAACTTCAGGCTAGAGTGATGATGTGGTTGGCAAGTCAAGAAATGGAAGAAAAGAATGGTAGCAAAGAATCAACACCAACACTATCCCTTTCATTGCAACCTCGAGCATTATTAATGCATACCTCACATGGCTTTTCCGTAAAGCGATCTCTTCAAAATTTCCTTGAGAAAAGAAAGGAAAGGATTCAAAGTCACGTTATAACTCATGATAATAATAGTACAAATTAG 333 0.3604 MKRNFCLESHKSMNEELNVNHQFVVNIPHHKFEERELQARVMMWLASQEMEEKNGSKESTPTLSLSLQPRALLMHTSHGFSVKRSLQNFLEKRKERIQSHVITHDNNSTN* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5920 110 Pfam Jas motif 83 98 IPR018467 -
Tpr2g5920 110 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 3 103 IPR040390 -
Tpr2g5920 110 PANTHER DIVERGENT CCT MOTIF PROTEIN 3 103 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5920 37 104 Tify Gene Family AT1G30135 40.000 9.10e-06 40.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g5920 Jas_motif 1.2e-06 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5920 - K13464 mtr:MTR_3g081210 144.436